Gene
Gene Model ID | pfu_aug1.0_21093.1_62062 |
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Locus | scaffold21093.1 : 7586 ... 20270 : + |
To GenomeBrowser | scaffold21093.1:7586..20270 |
Genes list of scaffold | scaffold21093.1 |
Synonym | pfu_aug2.0_914.1_14653 |
Manual annotation
Study field | Biomineralization |
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Gene name | Pfty2A |
Description | NCBI Blastp search "BAF42772.1" |
mRNA evidence |
Hmmer Search for Pfam
query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
---|---|---|---|---|---|---|---|---|---|---|
pfu_aug1.0_21093.1_62062.t1 | 2 | 1 | Tyrosinase | 40 | 85 | 6.9e-22 | 78.7 | 0.058 | 850.0 | -0.1 |
pfu_aug1.0_21093.1_62062.t1 | 2 | 2 | Tyrosinase | 147 | 311 | 6.9e-22 | 78.7 | 1.8e-25 | 2.6e-21 | 76.7 |
Expression profile
(Color code: FPKM>10&<50, blue; FPKM>50, pink)Libraries | EST count |
---|---|
>Embryonic/Larval stages | |
mix | 1 |
>Adult tissues | |
mantle | 1 |
mantleEdge | 1 |
mantlePallium | 1 |
Transcript
Transcript ID | pfu_aug1.0_21093.1_62062.t1 |
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Definition | - |
>pfu_aug1.0_21093.1_62062.t1 atgaacaccggtgtctttgtcagtatacgtgttaataaatataccaagatgaagaaattattggcgcttgctgcgagcct tcccttattgttatgcgtccattgtatcaaagaaaaggaaatactgaaggaatcatataagcaaaaatgtatgaagaatg cggtctatgacttcaattctacaaatcctactaccctggagccaaaatgtgctacactctttgggcacgagtattcggat ataaagaacttcctcaagttcgacgatcaacaaatgaactatattttgtcattggagagagctatgatgcgtacgcaaca caggaacaataaacggcataagcgacaagcaatgatgaggccccggcaggaatgtaggactttgagtgaccctgatagaa acgctctttttggcgccatcgttactttaaaacaaccgtatgaagaagcgttacaggaaattcgtcccggtgtcgcattg tgttattgggattccacgttagattatttgatgccaggggatagtcaaagaaggaccgtggctttctctgatgaactatt tggaaatggacgtggtgcagttataaatagtcaatttgcaaattggcgtctttctgataatacccccttaagacgaatga tcggagagaataattcaagtttgacacgacctggcattgttgaccttattctaacagatccaagaataaatcgtcatcga tggattgtgaatgagggatcgaggtttaatcaaagtcccagatttggtttcatcgaccctgatagcggcatgagacatag ctgggaaagagaacatgataatacacatgtgtgggtaggcggaatcatggttaatgtggagaggtcacctgaagatccag tgttttggttccatcatttatatatcgactacgtttgggaacttttccgaagaaaaattgatccaatggacagattcgat ttgcgtacagattaccccatggattcagttaatgagcagcatagagcttttcaaacaatggcaggctttcctgcttacag aaatatcgacggataccacaatttcttcagaagaatgtatgcacctcatcctagatgcagtaacaactgtggtggctcaa gatttctaaggtgtcctgacattggtccaatgggaaatccagatcgtcgatgtgtatctcttgcaatcgattctgatgtg gtgccagcagcggcggcttcccctgctgcagcaatggctggctttggagcatctcgtgcaggatttgcagcctttggagg accagcagcaatggcttccggtggtgccgctagagtttctctgcaagccacagatgaagttgcgatgcgagcagcaatga gtgcaccacaaacagttgtccaaggtccaaacttcacttcctcgagagctgatagcagacttttattaagctaa |
Protein
Protein ID | pfu_aug1.0_21093.1_62062.t1 |
---|---|
Definition | - |
>pfu_aug1.0_21093.1_62062.t1 MNTGVFVSIRVNKYTKMKKLLALAASLPLLLCVHCIKEKEILKESYKQKCMKNAVYDFNSTNPTTLEPKCATLFGHEYSD IKNFLKFDDQQMNYILSLERAMMRTQHRNNKRHKRQAMMRPRQECRTLSDPDRNALFGAIVTLKQPYEEALQEIRPGVAL CYWDSTLDYLMPGDSQRRTVAFSDELFGNGRGAVINSQFANWRLSDNTPLRRMIGENNSSLTRPGIVDLILTDPRINRHR WIVNEGSRFNQSPRFGFIDPDSGMRHSWEREHDNTHVWVGGIMVNVERSPEDPVFWFHHLYIDYVWELFRRKIDPMDRFD LRTDYPMDSVNEQHRAFQTMAGFPAYRNIDGYHNFFRRMYAPHPRCSNNCGGSRFLRCPDIGPMGNPDRRCVSLAIDSDV VPAAAASPAAAMAGFGASRAGFAAFGGPAAMASGGAARVSLQATDEVAMRAAMSAPQTVVQGPNFTSSRADSRLLLS |