Gene
Gene Model ID | pfu_aug1.0_24112.1_11591 |
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Locus | scaffold24112.1 : 877 ... 19421 : - |
To GenomeBrowser | scaffold24112.1:877..19421 |
Genes list of scaffold | scaffold24112.1 |
Synonym | NA |
Manual annotation
Study field | Biomineralization |
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Gene name | beta-1,3-N-acetylglucosaminyltransferase radical fringe like 2 |
Description | Best hit Bos taurus fng by NCBI BLAST. beta-1,3-N-acetylglucosaminyltransferase radical fringe like 2likes beta-1,3-N-acetylglucosaminyltransferase radical fringe like. |
mRNA evidence |
Study field | signal molecules |
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Gene name | beta-1,3-N-acetylglucosaminyltransferase radical fringe, putative like 2 |
Description | Best hit beta-1,3-N-acetylglucosaminyltransferase radical fringe, putative [Ixodes scapularis] by NCBI BLAST |
mRNA evidence |
Hmmer Search for Pfam
query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
---|---|---|---|---|---|---|---|---|---|---|
pfu_aug1.0_24112.1_11591.t1 | 1 | 1 | Fringe | 1 | 77 | 8.4e-26 | 90.6 | 7.3e-30 | 1.1e-25 | 90.3 |
Blast Hit to nr / sp
query | Subject ID | Subject Name | evalue |
---|---|---|---|
pfu_aug1.0_24112.1_11591.t1 | gi|340721222|ref|XP_003399023.1| | 3.0e-17 |
Transcript
Transcript ID | pfu_aug1.0_24112.1_11591.t1 |
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Definition | - |
>pfu_aug1.0_24112.1_11591.t1 ttggttttgtcatgtcgacgacgacaattaccttaatgttgacctactactacaaatgttaagggggtatgacccctcag agctgtggtatttaggcagagcaagtcgtgatcatccagttacgccaccaagaaaaaacctgaaacatattaagttttgg tttgcaacacttggtgctggcgtctgtattagcaaagctttagcaaagaaaatgttgccacatgcgagaaattttgcttt aaattgtaaatatttacacaaaaagagttataattcaacattgaatattgaaccgcatgagaagggtcattattcagcgt tgaatgttgacccgcaccggaaagcgggtattttggtgctttgttgtgagtgctgcaaccgactccggttggaggtcctc tcctatcttcaagataggacaaaggatcaaggtccagtcttttttggcgagattcgagaaatctcctag |
Protein
Protein ID | pfu_aug1.0_24112.1_11591.t1 |
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Definition | - |
>pfu_aug1.0_24112.1_11591.t1 WFCHVDDDNYLNVDLLLQMLRGYDPSELWYLGRASRDHPVTPPRKNLKHIKFWFATLGAGVCISKALAKKMLPHARNFAL NCKYLHKKSYNSTLNIEPHEKGHYSALNVDPHRKAGILVLCCECCNRLRLEVLSYLQDRTKDQGPVFFGEIREIS |