Gene
Gene Model ID | pfu_aug1.0_2417.1_30112 |
---|---|
Locus | scaffold2417.1 : 24774 ... 48855 : - |
To GenomeBrowser | scaffold2417.1:24774..48855 |
Genes list of scaffold | scaffold2417.1 |
Synonym | pfu_aug2.0_98.1_26831 |
Manual annotation
Study field | 20 basic cell biology |
---|---|
Gene name | argonaute-like |
Description | NCBI BlastP top hit to Nasonia vitripennis argonaute-2-like [XP_001601049.2] |
mRNA evidence |
Hmmer Search for Pfam
query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
---|---|---|---|---|---|---|---|---|---|---|
pfu_aug1.0_2417.1_30112.t1 | 1 | 1 | DUF1785 | 204 | 256 | 1.6e-22 | 78.5 | 6.2e-26 | 3.1e-22 | 77.6 |
pfu_aug1.0_2417.1_30112.t1 | 1 | 1 | PAZ | 264 | 397 | 4.1e-37 | 126.5 | 1.2e-40 | 6.0e-37 | 125.9 |
Blast Hit to nr / sp
query | Subject ID | Subject Name | evalue |
---|---|---|---|
pfu_aug1.0_2417.1_30112.t1 | gi|170039525|ref|XP_001847582.1| | eukaryotic translation initiation factor 2C 2 [Culex quinquefasciatus] | 0.0 |
Transcript
Transcript ID | pfu_aug1.0_2417.1_30112.t1 |
---|---|
Definition | - |
>pfu_aug1.0_2417.1_30112.t1 atgcaagaaggtcaaacatcgtcaattccattctctgcctttcggcccatgcaagaggtccctcctcctcaaccccctcc acctggaccgcccggccctcctggtccccctggaccacccggtccccctggacaaccaccgagaccatcagactttatat gtccaccaagacctaaccatggcacagagggcaaacctatactgctcagggctaaccatttccaagtgcgcatccctaag ggagtcattcatcattatgacatctccattactcctgataaatgtcccaggcgtgttaacagagaaatcatagacacaat ggtagcagcctatagtcagaaaattttctcaggacaaaaaccggtatttgatggaaggaaaaacttgtacagtagagatc cactccctataggaagagataaggttgaattagaagtcactctcccaggggaaggcaaagacagggttttcaatattaca atgaaatgggtccagcaaattagcttgtttggactcgaggaggcattacagggaaaagtacgggaaattccagctgacgc aataatggccgtagatattatcatgcgtcatttacccagcatgacgtatacccctgtgggtcgttcctttttctctccac ctgaaggatatgatcatcccctgggagggggtagagaggtgtggtttggtttccatcagagtgtgcgtccctcccactgg aaaatgatgctcaatatagatgtgtcagctacagccttttacaaagctcagcctgttatagaattcatgtgtgaggtgtt agacatgaaggatgtgaatgaacagaaacgtcctcttactgactctcagagggtcaagtttacaaaggaaatcaaagggc tgaaagtagagattacacattgtggtactatgaggaggaagtacagagtgtgcaatgtaactcgcagacctgctcaaact caatcattcccactccagttagattctggacaaactgtagaatgtacagtagctagatatttcttagaacgctacaaaat gaaactacaatatcctcatctaccatgtttacaagtagggcaagaacaaaaacatacctatcttccattagaggtctgta acgtggtcgggggacagagatgtatcaagaagctgacagatatgcagacgtctnaccatgatcaagttaaaatgaataaa atgctacatcagaacctacagaaaatttctaagtga |
Protein
Protein ID | pfu_aug1.0_2417.1_30112.t1 |
---|---|
Definition | - |
>pfu_aug1.0_2417.1_30112.t1 MQEGQTSSIPFSAFRPMQEVPPPQPPPPGPPGPPGPPGPPGPPGQPPRPSDFICPPRPNHGTEGKPILLRANHFQVRIPK GVIHHYDISITPDKCPRRVNREIIDTMVAAYSQKIFSGQKPVFDGRKNLYSRDPLPIGRDKVELEVTLPGEGKDRVFNIT MKWVQQISLFGLEEALQGKVREIPADAIMAVDIIMRHLPSMTYTPVGRSFFSPPEGYDHPLGGGREVWFGFHQSVRPSHW KMMLNIDVSATAFYKAQPVIEFMCEVLDMKDVNEQKRPLTDSQRVKFTKEIKGLKVEITHCGTMRRKYRVCNVTRRPAQT QSFPLQLDSGQTVECTVARYFLERYKMKLQYPHLPCLQVGQEQKHTYLPLEVCNVVGGQRCIKKLTDMQTSXHDQVKMNK MLHQNLQKISK |