Gene
Gene Model ID | pfu_aug1.0_24801.1_19033 |
---|---|
Locus | scaffold24801.1 : 1446 ... 4380 : + |
To GenomeBrowser | scaffold24801.1:1446..4380 |
Genes list of scaffold | scaffold24801.1 |
Synonym | pfu_aug2.0_1108.1_28058 |
Manual annotation
Study field | Transcription Factors |
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Gene name | Pfu-PTFa1 |
Description | Best hit to AAI01137 Fer3-like (Drosophila) [Homo sapiens] with 7e-25 by a BLASTP search against NCBI Homo sapiens nr database. This annotation is based on NJ, ML, and BI. |
mRNA evidence |
Hmmer Search for Pfam
query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
---|---|---|---|---|---|---|---|---|---|---|
pfu_aug1.0_24801.1_19033.t1 | 1 | 1 | HLH | 104 | 155 | 1.4e-15 | 56.7 | 6.2e-19 | 3.1e-15 | 55.6 |
Blast Hit to nr / sp
query | Subject ID | Subject Name | evalue |
---|---|---|---|
pfu_aug1.0_24801.1_19033.t1 | gi|242007238|ref|XP_002424449.1| | protein lin-32, putative [Pediculus humanus corporis] | 6.0e-21 |
Transcript
Transcript ID | pfu_aug1.0_24801.1_19033.t1 |
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Definition | - |
>pfu_aug1.0_24801.1_19033.t1 atgggtacagattatctatctgaatttcaatcttttcaaaccggtgattttaatgagctgctggaatatacagcctttct atttaacgaagagacgggagaaagcagctcatctaactttgaagcatgtctggcggaggagacgacctttgaaaggattc cgcaataccatgagtctgtgagaccagagttaatgacactgaggacagcaaccaataataaccaagaagaaagagaaaca gccaatcaagtatcgagaacttgtgctgaaaatttgaaaccgaaaaggaagcgagatcaaacagtatcacaacgaaaagc tgccaacgtaagagaacggaggcggatggtgacgttgaataaagcctttgacgatctgagaaaaagactcccagctttcg actacgaaaagaaactgtcaagaatagacactctaagactagcaatcacgtatatatcttttatgaaggggttagaaatg gaaaatccgaaaaatcagaactga |
Protein
Protein ID | pfu_aug1.0_24801.1_19033.t1 |
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Definition | - |
>pfu_aug1.0_24801.1_19033.t1 MGTDYLSEFQSFQTGDFNELLEYTAFLFNEETGESSSSNFEACLAEETTFERIPQYHESVRPELMTLRTATNNNQEERET ANQVSRTCAENLKPKRKRDQTVSQRKAANVRERRRMVTLNKAFDDLRKRLPAFDYEKKLSRIDTLRLAITYISFMKGLEM ENPKNQN |