Gene
Gene Model ID | pfu_aug1.0_27236.1_04567 |
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Locus | scaffold27236.1 : 8 ... 7620 : + |
To GenomeBrowser | scaffold27236.1:8..7620 |
Genes list of scaffold | scaffold27236.1 |
Synonym | pfu_aug2.0_1242.1_08281 |
Manual annotation
Study field | Environmental Response |
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Gene name | Gamma-aminobutyric acid type B receptor subunit 2 |
Description | Similar to EFN70737.1| Gamma-aminobutyric acid type B receptor subunit 2 [Camponotus floridanus |
mRNA evidence |
Hmmer Search for Pfam
query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
---|---|---|---|---|---|---|---|---|---|---|
pfu_aug1.0_27236.1_04567.t1 | 1 | 1 | 7tm_3 | 11 | 117 | 9.8e-17 | 61.0 | 8.5e-21 | 1.3e-16 | 60.7 |
Blast Hit to nr / sp
query | Subject ID | Subject Name | evalue |
---|---|---|---|
pfu_aug1.0_27236.1_04567.t1 | gi|307184271|gb|EFN70737.1| | Gamma-aminobutyric acid type B receptor subunit 2 [Camponotus floridanus] | 7.0e-24 |
Transcript
Transcript ID | pfu_aug1.0_27236.1_04567.t1 |
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Definition | - |
>pfu_aug1.0_27236.1_04567.t1 atgcttttctacaatgatacaaccaaagatgtaataatgacagagacgaattccatttgtgaccacgagttgaaaatcta ttggctggcagcacagtacgtgtataagggcctgctacttgcttttggtgcttttattgcctgggagacgagacacatct cgattccatccatcaacgattctaagtacatcggcttttgtgtgtacaatgtggtagtcgtgtgtgccctgtatgtgcct gtacacacgttcctgtcacctgaagatgtgacgttgaaatacgtgctcagtagttgcatagtcgtgtttgcaactacttt ggtcctgtgcattttgttcattccaaaggtacttgatgtccgtagtctgatgtgcaaaatcaaggtttttaacggtcgct tccgaaaacttgaaaattga |
Protein
Protein ID | pfu_aug1.0_27236.1_04567.t1 |
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Definition | - |
>pfu_aug1.0_27236.1_04567.t1 MLFYNDTTKDVIMTETNSICDHELKIYWLAAQYVYKGLLLAFGAFIAWETRHISIPSINDSKYIGFCVYNVVVVCALYVP VHTFLSPEDVTLKYVLSSCIVVFATTLVLCILFIPKVLDVRSLMCKIKVFNGRFRKLEN |