Gene
Gene Model ID | pfu_aug1.0_28106.1_62511 |
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Locus | scaffold28106.1 : 2907 ... 6975 : + |
To GenomeBrowser | scaffold28106.1:2907..6975 |
Genes list of scaffold | scaffold28106.1 |
Synonym | NA |
Manual annotation
Study field | structural proteins |
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Gene name | twitchin |
Description | Twitchin partial sequence. BLASTP top hit to AB062881 (Mytius galloprovincialis). |
mRNA evidence |
Hmmer Search for Pfam
query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
---|---|---|---|---|---|---|---|---|---|---|
pfu_aug1.0_28106.1_62511.t1 | 1 | 1 | I-set | 9 | 102 | 6.1e-18 | 64.4 | 3.7e-21 | 7.7e-18 | 64.1 |
pfu_aug1.0_28106.1_62511.t1 | 1 | 1 | Ig_2 | 21 | 102 | 8.4e-09 | 35.4 | 5.4e-12 | 1.2e-08 | 35.0 |
Transcript
Transcript ID | pfu_aug1.0_28106.1_62511.t1 |
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Definition | - |
>pfu_aug1.0_28106.1_62511.t1 atgggggtaggagacgatacggctccgaggtttacccagaagcccgtcctaaaacaggaggacaatggcgccaaattggt gttccagtgtacgctggaagcctcgcctaaacctgatatacagtggtaccaaggtacaacgcccatttctcagtcggaca ggattaaaatgcgggtagaacctgccggcggcaacaagtacaatgtgatgatggacattttaggtgttacacaagctgac ggtggaacatacaaagtagtggccaaaaataaactaggagaggtctcggcctctatcaatctcaacttcagcgcgaaatt taatgcgtttttaaaagaggataccaagaagctttcaagcccgtgtcggttagcctatcatctcaactgtaacaacatgt ga |
Protein
Protein ID | pfu_aug1.0_28106.1_62511.t1 |
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Definition | - |
>pfu_aug1.0_28106.1_62511.t1 MGVGDDTAPRFTQKPVLKQEDNGAKLVFQCTLEASPKPDIQWYQGTTPISQSDRIKMRVEPAGGNKYNVMMDILGVTQAD GGTYKVVAKNKLGEVSASINLNFSAKFNAFLKEDTKKLSSPCRLAYHLNCNNM |