Gene
Gene Model ID | pfu_aug1.0_28617.1_26433 |
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Locus | scaffold28617.1 : 1 ... 4418 : + |
To GenomeBrowser | scaffold28617.1:1..4418 |
Genes list of scaffold | scaffold28617.1 |
Synonym | NA |
Manual annotation
Study field | other developmental genes |
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Gene name | PAX6_like |
Description | BLAST hits to GU224214.1 and simple NJ tree also showed an affinity to pax6. (human) |
mRNA evidence |
Hmmer Search for Pfam
query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
---|---|---|---|---|---|---|---|---|---|---|
pfu_aug1.0_28617.1_26433.t1 | 1 | 1 | Homeobox | 142 | 198 | 2.4e-24 | 84.7 | 1.6e-27 | 5.8e-24 | 83.4 |
Blast Hit to nr / sp
query | Subject ID | Subject Name | evalue |
---|---|---|---|
pfu_aug1.0_28617.1_26433.t1 | gi|195012799|ref|XP_001983749.1| | GH16064 [Drosophila grimshawi] | 2.0e-30 |
Transcript
Transcript ID | pfu_aug1.0_28617.1_26433.t1 |
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Definition | - |
>pfu_aug1.0_28617.1_26433.t1 aaccatatcggggataagcttaaaattgaatgcgattgtcataaactgtacgtggtattttcaatttcaggcatatgtac acagtgcaatcttcccagtgtaagctctatcaacaggattctacgtaatagggcggcagacagagcagccatagcatacg cccgtatagtagaacattccttcttgccgatgccctaccctcctcccgtgtggcaatccccactgtaccctataaatgaa cccttatacattccatctacatctcaaagaccgataggacctagtccagaaaagatagagacagataaaagagaggatac taccaaagaaagaacgtcattaccagaatctacggaacaggaagtggttactgcagacgattcagacaccgaaacagacg acagtttttccagccagaaactaagacggaatagaactacattcacatctgaacaactcgacattcttgagcgagagttc gaaaaaactcattatccgggcattaacacgagggaggaattggcgacaaaaaccaaactttcagaggcaagagtgcaggt atggttttcaaacagaagagcaaagtggcgaaggacccagcgattttcgtttcttcacaacacgaccagggctcttttct ccgcctattcgcccaactcgctcgtgacgtcactggatagagaccatagtaccatactagacaggagagtgggcgtggag gacagtccgtatgataccaagtctaagtctgtacccagcatgggtagtgaacattcagcttttgatagaatatcgagtcc tggggacacagattcggaaaacgtagacaaagaataa |
Protein
Protein ID | pfu_aug1.0_28617.1_26433.t1 |
---|---|
Definition | - |
>pfu_aug1.0_28617.1_26433.t1 NHIGDKLKIECDCHKLYVVFSISGICTQCNLPSVSSINRILRNRAADRAAIAYARIVEHSFLPMPYPPPVWQSPLYPINE PLYIPSTSQRPIGPSPEKIETDKREDTTKERTSLPESTEQEVVTADDSDTETDDSFSSQKLRRNRTTFTSEQLDILEREF EKTHYPGINTREELATKTKLSEARVQVWFSNRRAKWRRTQRFSFLHNTTRALFSAYSPNSLVTSLDRDHSTILDRRVGVE DSPYDTKSKSVPSMGSEHSAFDRISSPGDTDSENVDKE |