Gene
Gene Model ID | pfu_aug1.0_2973.1_59082 |
---|---|
Locus | scaffold2973.1 : 51246 ... 60251 : + |
To GenomeBrowser | scaffold2973.1:51246..60251 |
Genes list of scaffold | scaffold2973.1 |
Synonym | NA |
Manual annotation
Study field | other developmental genes |
---|---|
Gene name | hex |
Description | High BLAST hits with various metazoans hex genes. |
mRNA evidence |
Study field | other developmental genes |
---|---|
Gene name | hex |
Description | The best hit to EU196052.1 Patiria miniata hematopoietically expressed homeobox protein (Hex) |
mRNA evidence |
Hmmer Search for Pfam
query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
---|---|---|---|---|---|---|---|---|---|---|
pfu_aug1.0_2973.1_59082.t1 | 1 | 1 | Homeobox | 13 | 65 | 1.2e-21 | 76.0 | 7.5e-25 | 1.9e-21 | 75.4 |
Blast Hit to nr / sp
query | Subject ID | Subject Name | evalue |
---|---|---|---|
pfu_aug1.0_2973.1_59082.t1 | gi|45382607|ref|NP_990583.1| | hematopoietically-expressed homeobox protein HHEX [Gallus gallus] | 6.0e-37 |
Transcript
Transcript ID | pfu_aug1.0_2973.1_59082.t1 |
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Definition | - |
>pfu_aug1.0_2973.1_59082.t1 atgcagagaccacttcataaaagaaaaggtggacaagtacgattctcaaatgaccagactgtggaactggagaagaaatt cgattcccagaagtacttatctcctccagaaagaaaacgacttgcaaaattattacaactaacagaaagacaggttaaaa cttggtttcaaaatcgtagagcaaaatggaggcgtttgaaacaggaatcacctacatgtgaaaaacaagaagaggcacaa ggtcaaggtgatgatgacaaaatggacgccaaagaactggaatataaaaatcagtgtacgtctgatgaagatgactttga tgtagatgagtcggacgatgaaatagatgttgttaaagatgaaaatgaaaaagataacaacagataa |
Protein
Protein ID | pfu_aug1.0_2973.1_59082.t1 |
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Definition | - |
>pfu_aug1.0_2973.1_59082.t1 MQRPLHKRKGGQVRFSNDQTVELEKKFDSQKYLSPPERKRLAKLLQLTERQVKTWFQNRRAKWRRLKQESPTCEKQEEAQ GQGDDDKMDAKELEYKNQCTSDEDDFDVDESDDEIDVVKDENEKDNNR |