Gene
Gene Model ID | pfu_aug1.0_3094.1_30342 |
---|---|
Locus | scaffold3094.1 : 87186 ... 91902 : + |
To GenomeBrowser | scaffold3094.1:87186..91902 |
Genes list of scaffold | scaffold3094.1 |
Synonym | pfu_aug2.0_3100.1_02326 |
Manual annotation
Study field | 20 basic cell biology |
---|---|
Gene name | argonaute-like |
Description | NCBI blastP top hit to Branchiostoma floridae hypothetical protein BRAFLDRAFT_126413 [XP_002611939.1] |
mRNA evidence |
Hmmer Search for Pfam
query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
---|---|---|---|---|---|---|---|---|---|---|
pfu_aug1.0_3094.1_30342.t1 | 1 | 1 | Piwi | 236 | 327 | 6.7e-39 | 133.6 | 5.60519e-43 | 8.3e-39 | 133.3 |
Expression profile
(Color code: FPKM>10&<50, blue; FPKM>50, pink)Libraries | EST count |
---|---|
>Embryonic/Larval stages | |
8-16cell | 1 |
egg-Dshape | 1 |
>Adult tissues | |
Dshape | 1 |
Transcript
Transcript ID | pfu_aug1.0_3094.1_30342.t1 |
---|---|
Definition | - |
>pfu_aug1.0_3094.1_30342.t1 atggttgtagagcttaacacgttactactcaannnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnntaatctcgccaacccaccc cctggtaccgttattgacactgtagtcaccaaaccggagtggtacgatttcttcctcgtgtcccagtctgtacgtcaggg tacggtaacgcccactcactacaatgttatctgggatacatcgggactgaagccagatcacatgcagagattggcctaca agctgtgtcatctgtactacaactggccgggaaccatccgggtacctgcaccgtgccaatatgcacataaacttgccttc ttggtcggtcagtccattcacaaggatccatccttagctctgtgtgacaggttgtatttcctatag |
Protein
Protein ID | pfu_aug1.0_3094.1_30342.t1 |
---|---|
Definition | - |
>pfu_aug1.0_3094.1_30342.t1 MVVELNTLLLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNLANPP PGTVIDTVVTKPEWYDFFLVSQSVRQGTVTPTHYNVIWDTSGLKPDHMQRLAYKLCHLYYNWPGTIRVPAPCQYAHKLAF LVGQSIHKDPSLALCDRLYFL |