Gene
Gene Model ID | pfu_aug1.0_3120.1_51887 |
---|---|
Locus | scaffold3120.1 : 1023 ... 4025 : - |
To GenomeBrowser | scaffold3120.1:1023..4025 |
Genes list of scaffold | scaffold3120.1 |
Synonym | pfu_aug2.0_35.1_16764 |
Manual annotation
Hmmer Search for Pfam
query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
---|---|---|---|---|---|---|---|---|---|---|
pfu_aug1.0_3120.1_51887.t1 | 1 | 1 | Ribosomal_L7Ae | 3 | 74 | 2.0e-06 | 27.2 | 1.7e-10 | 2.5e-06 | 26.9 |
Expression profile
(Color code: FPKM>10&<50, blue; FPKM>50, pink)Libraries | EST count |
---|---|
>Embryonic/Larval stages | |
mix | 1 |
8-16cell | 1 |
trochophore | 1 |
>Adult tissues | |
Dshape | 1 |
Transcript
Transcript ID | pfu_aug1.0_3120.1_51887.t1 |
---|---|
Definition | - |
>pfu_aug1.0_3120.1_51887.t1 atggtcaccaaggccatggtggaaggaagaaccacgtgtggggtgatagcctgtgctcaacttctcaacacgaaccctga tgacgtcactctgtgcatcttgcctgtggagacagacgaggacgtcaccatccacatccagcatacccttatagaggcat tctgctgggaaaacgatatagtgaccgttaaggttgatagtactgagaagcttggcatgttattctcagcccttggttcc actaactacaataacaacaacaaggtcgccgaggattacaattgtgtgctgatttcatgcccgcagacgaccgccacgga ccataccctgaacgacatcgtcaatgcagacgaccatcctatcattgaaattcctgtcgactga |
Protein
Protein ID | pfu_aug1.0_3120.1_51887.t1 |
---|---|
Definition | - |
>pfu_aug1.0_3120.1_51887.t1 MVTKAMVEGRTTCGVIACAQLLNTNPDDVTLCILPVETDEDVTIHIQHTLIEAFCWENDIVTVKVDSTEKLGMLFSALGS TNYNNNNKVAEDYNCVLISCPQTTATDHTLNDIVNADDHPIIEIPVD |