Gene
Gene Model ID | pfu_aug1.0_3120.1_51890 |
---|---|
Locus | scaffold3120.1 : 58976 ... 63451 : + |
To GenomeBrowser | scaffold3120.1:58976..63451 |
Genes list of scaffold | scaffold3120.1 |
Synonym | pfu_aug2.0_35.1_16761 |
Manual annotation
Hmmer Search for Pfam
query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
---|---|---|---|---|---|---|---|---|---|---|
pfu_aug1.0_3120.1_51890.t1 | 1 | 1 | Ribosomal_L7Ae | 23 | 103 | 2.1e-07 | 30.3 | 2.5e-11 | 3.7e-07 | 29.5 |
Expression profile
(Color code: FPKM>10&<50, blue; FPKM>50, pink)Libraries | EST count |
---|---|
>Embryonic/Larval stages | |
mix | 2 |
egg-4cell | 2 |
8-16cell | 1 |
egg-Dshape | 1 |
trochophore | 2 |
>Adult tissues | |
Dshape | 1 |
mantleEdge | 1 |
mantlePallium | 1 |
Transcript
Transcript ID | pfu_aug1.0_3120.1_51890.t1 |
---|---|
Definition | - |
>pfu_aug1.0_3120.1_51890.t1 atgactttacccgaagcttgcaaaatggaaaaaccagttctcaagaagtcgatgaatattggagaagccgtgaaggaagt tctgctacaggcgctgggcgaaaaccgcatcacttacggagtgtatgcttgcgctaaagaattagaaataagtccagaga ctgtgatgttatgtgttctgccacacgctgaccaggtgcatgatgttgcaattcacatacaacacaccctgatggaggcg tactgcctggagcatgacatacaaatccttaaggttgacgaatctagaaagttggcagcgatactggcataccaacagga ctcggccaacaacaacgagcagacgacagacgagcgcctcctgacggacttcagtagtgtgataattcagaatccgaagc agaagagcaatgcagagcagtttgtgatcgacttttgtcacatggtgtccgaaaacgaggtctttcctaaacctaaaata gaactaccagtttga |
Protein
Protein ID | pfu_aug1.0_3120.1_51890.t1 |
---|---|
Definition | - |
>pfu_aug1.0_3120.1_51890.t1 MTLPEACKMEKPVLKKSMNIGEAVKEVLLQALGENRITYGVYACAKELEISPETVMLCVLPHADQVHDVAIHIQHTLMEA YCLEHDIQILKVDESRKLAAILAYQQDSANNNEQTTDERLLTDFSSVIIQNPKQKSNAEQFVIDFCHMVSENEVFPKPKI ELPV |