Gene
Gene Model ID | pfu_aug1.0_33.1_43421 |
---|---|
Locus | scaffold33.1 : 25599 ... 40215 : - |
To GenomeBrowser | scaffold33.1:25599..40215 |
Genes list of scaffold | scaffold33.1 |
Synonym | pfu_aug2.0_5309.1_32779 |
Manual annotation
Study field | Biomineralization |
---|---|
Gene name | PFMG11A |
Description | reciprocal BLASTN best hit to DQ116438.1 Pinctada fucata mantle protein 11 (MG11) mRNA |
mRNA evidence |
Blast Hit to nr / sp
query | Subject ID | Subject Name | evalue |
---|---|---|---|
pfu_aug1.0_33.1_43421.t1 | gi|71063304|gb|AAZ22320.1| | mantle protein 11 [Pinctada fucata] | 0.0 |
Expression profile
(Color code: FPKM>10&<50, blue; FPKM>50, pink)Libraries | EST count |
---|---|
>Embryonic/Larval stages | |
mix | 1 |
>Adult tissues |
Transcript
Transcript ID | pfu_aug1.0_33.1_43421.t1 |
---|---|
Definition | - |
>pfu_aug1.0_33.1_43421.t1 atgttgtcaatcaacaactcaagcatccggatgatatcttcttcggtatactttttgtttgaatcagagtgttccttcac gaatagatataaggtagttcaagatcagagtcatcagtatgaataccgaaggacgcaagaacagatttgtggttgtcaag tatttcagatacagataagcttgagtatcaggagttatcgttcttaccgttcatacagttattcttaccgatattaccgt tattcttccggttacacctaccgttactacaggtcgtactactacgattattcctacaccagtagtagatcggggagtac cacaggaatcattgttggcagtaccatagccgggttaataatagctggttcttttctgttcatctgctggttctgttgga aaagacgcaggtcccagtccaggagcggtagagtcatacaaacaaataatgtaaccagcatatcaccttcaagagctgta tgtgctgtcaatcccaacgtggtcacctatactacacaggaaggtaacaatgcctacatccctgctgttaatccaccaaa atacgaaactgttgtccaaaacggatcagccgactctactggtcagagctatggacagcctcctccctaccctgttacca ctgactcagagacacatggacagcagaatgatcacgtgactcatgatacagctaaacttgtaaaagactag |
Protein
Protein ID | pfu_aug1.0_33.1_43421.t1 |
---|---|
Definition | - |
>pfu_aug1.0_33.1_43421.t1 MLSINNSSIRMISSSVYFLFESECSFTNRYKVVQDQSHQYEYRRTQEQICGCQVFQIQISLSIRSYRSYRSYSYSYRYYR YSSGYTYRYYRSYYYDYSYTSSRSGSTTGIIVGSTIAGLIIAGSFLFICWFCWKRRRSQSRSGRVIQTNNVTSISPSRAV CAVNPNVVTYTTQEGNNAYIPAVNPPKYETVVQNGSADSTGQSYGQPPPYPVTTDSETHGQQNDHVTHDTAKLVKD |