Gene
Gene Model ID | pfu_aug1.0_33105.1_62721 |
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Locus | scaffold33105.1 : 716 ... 5139 : + |
To GenomeBrowser | scaffold33105.1:716..5139 |
Genes list of scaffold | scaffold33105.1 |
Synonym | NA |
Manual annotation
Study field | other developmental genes |
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Gene name | Tbx21 |
Description | Blast hits to Tbx21, Eomes, Tbr1. Simple NJ tree shows an affinity to HsTbx21, HsEomes, and HsTbr1. |
mRNA evidence |
Hmmer Search for Pfam
query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
---|---|---|---|---|---|---|---|---|---|---|
pfu_aug1.0_33105.1_62721.t1 | 1 | 1 | T-box | 5 | 41 | 6.2e-12 | 45.3 | 4.2e-16 | 6.2e-12 | 45.3 |
Transcript
Transcript ID | pfu_aug1.0_33105.1_62721.t1 |
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Definition | - |
>pfu_aug1.0_33105.1_62721.t1 atgttcgttggtcgagtctacctccatcctgattctccaagcagcggttcccattggatgaaacagtacattgtttttgg aaagctgaaactaacaaataacagaaataacgatcagggccatccatccaaccccgccatttattacagtacatcactct atagtgctaaaccgtccgacaaagtttacatgtacatgtatatacttttgaattatgaaattccttaa |
Protein
Protein ID | pfu_aug1.0_33105.1_62721.t1 |
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Definition | - |
>pfu_aug1.0_33105.1_62721.t1 MFVGRVYLHPDSPSSGSHWMKQYIVFGKLKLTNNRNNDQGHPSNPAIYYSTSLYSAKPSDKVYMYMYILLNYEIP |