Gene
Gene Model ID | pfu_aug1.0_3393.1_23296 |
---|---|
Locus | scaffold3393.1 : 12487 ... 17505 : - |
To GenomeBrowser | scaffold3393.1:12487..17505 |
Genes list of scaffold | scaffold3393.1 |
Synonym | pfu_aug2.0_105.1_16922 |
Manual annotation
Hmmer Search for Pfam
query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
---|---|---|---|---|---|---|---|---|---|---|
pfu_aug1.0_3393.1_23296.t1 | 1 | 1 | GST_C_3 | 53 | 122 | 1.0e-07 | 32.3 | 3.3e-11 | 1.2e-07 | 32.1 |
pfu_aug1.0_3393.1_23296.t1 | 1 | 1 | GST_C | 54 | 126 | 4.9e-15 | 55.2 | 2.2e-18 | 8.0e-15 | 54.5 |
pfu_aug1.0_3393.1_23296.t1 | 1 | 1 | GST_C_2 | 57 | 119 | 5.6e-08 | 32.5 | 2.1e-11 | 7.9e-08 | 32.0 |
Blast Hit to nr / sp
query | Subject ID | Subject Name | evalue |
---|---|---|---|
pfu_aug1.0_3393.1_23296.t1 | gi|110734709|gb|ABG88959.1| | elongation factor-1 gamma [Plectreurys tristis] | 1.0e-33 |
Transcript
Transcript ID | pfu_aug1.0_3393.1_23296.t1 |
---|---|
Definition | - |
>pfu_aug1.0_3393.1_23296.t1 atggcagctgggactctgtacacgtatccagacaatttcagagcttttaaagccctcattgctgcccagtacagcggtgc cgatgtcaaagttccaagcaacttcaagtttggagcgacaaataaagaggctgatttccttgcaaaattcccgttaggaa aggagacggagaaagctaaagagcaagtaaagaaagctatgacggtgctgaacaattatctgtcaacgcgaactttcctg gtcggtgagagaatatcgcaggcagacatcagcgtgtgttgtaacctcctaatgttgtatcagaatgtaatggatcctgg attcagacagccatttaaacacgtcaacagatggtttaccaccctcgttaaccagccacagttccgtaaagttataggag acttcaaattctgtaccaagatggcagagtttgatggtgggtag |
Protein
Protein ID | pfu_aug1.0_3393.1_23296.t1 |
---|---|
Definition | - |
>pfu_aug1.0_3393.1_23296.t1 MAAGTLYTYPDNFRAFKALIAAQYSGADVKVPSNFKFGATNKEADFLAKFPLGKETEKAKEQVKKAMTVLNNYLSTRTFL VGERISQADISVCCNLLMLYQNVMDPGFRQPFKHVNRWFTTLVNQPQFRKVIGDFKFCTKMAEFDGG |