Gene
Gene Model ID | pfu_aug1.0_422.1_43655 |
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Locus | scaffold422.1 : 25756 ... 52597 : + |
To GenomeBrowser | scaffold422.1:25756..52597 |
Genes list of scaffold | scaffold422.1 |
Synonym | pfu_aug2.0_126.1_20291 |
Manual annotation
Study field | Biomineralization |
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Gene name | homeobox B7 |
Description | BLASTP best hit to NCBI Accession AER99869 |
mRNA evidence |
Hmmer Search for Pfam
query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
---|---|---|---|---|---|---|---|---|---|---|
pfu_aug1.0_422.1_43655.t1 | 1 | 1 | Homeobox | 111 | 153 | 3.1e-11 | 42.7 | 4.1e-15 | 6.1e-11 | 41.7 |
Blast Hit to nr / sp
query | Subject ID | Subject Name | evalue |
---|---|---|---|
pfu_aug1.0_422.1_43655.t1 | gi|354474762|ref|XP_003499599.1| | PREDICTED: homeobox protein Hox-B7 isoform X1 [Cricetulus griseus] | 3.0e-17 |
Transcript
Transcript ID | pfu_aug1.0_422.1_43655.t1 |
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Definition | - |
>pfu_aug1.0_422.1_43655.t1 atgaacgattctacctacggtccagaccagcaatgtaacacatggtcaaacggaccatcatatccaacctcagaatcagt agaatcgaacactcccagaacaatgtgcaccagaccatattacaatgacgctatgccacacgactacacaatgagatcca atcacaattcaacgtctgatccattttcacgacacacaccctgcaatggactcactgtccaaaagcgtgacatccgaaat cagagtgatctgagcacggacatcggacagaagatgagcaatttccgtccaatgttcccctggatgaaaaatatgaaaga tataggtagaaaacgaggtcgtaagacatacaccagacaccaaacccttgaactagagaaggaattcctatacaaccgat acttgacccgccggcgtcgacaggagatcgcctccgccctcagcctgactgagaggcagaatatatatgcatacgttttg ccctaa |
Protein
Protein ID | pfu_aug1.0_422.1_43655.t1 |
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Definition | - |
>pfu_aug1.0_422.1_43655.t1 MNDSTYGPDQQCNTWSNGPSYPTSESVESNTPRTMCTRPYYNDAMPHDYTMRSNHNSTSDPFSRHTPCNGLTVQKRDIRN QSDLSTDIGQKMSNFRPMFPWMKNMKDIGRKRGRKTYTRHQTLELEKEFLYNRYLTRRRRQEIASALSLTERQNIYAYVL P |