Gene
Gene Model ID | pfu_aug1.0_438.1_07537 |
---|---|
Locus | scaffold438.1 : 20524 ... 25415 : - |
To GenomeBrowser | scaffold438.1:20524..25415 |
Genes list of scaffold | scaffold438.1 |
Synonym | NA |
Manual annotation
Hmmer Search for Pfam
query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
---|---|---|---|---|---|---|---|---|---|---|
pfu_aug1.0_438.1_07537.t1 | 1 | 1 | TIMP | 24 | 212 | 6.1e-34 | 117.1 | 1.1e-37 | 7.8e-34 | 116.8 |
Blast Hit to nr / sp
query | Subject ID | Subject Name | evalue |
---|---|---|---|
pfu_aug1.0_438.1_07537.t1 | gi|50299474|gb|AAT73610.1| | 2.0e-22 |
Expression profile
(Color code: FPKM>10&<50, blue; FPKM>50, pink)Libraries | EST count |
---|---|
>Embryonic/Larval stages | |
mix | 1 |
>Adult tissues | |
mantle | 1 |
Transcript
Transcript ID | pfu_aug1.0_438.1_07537.t1 |
---|---|
Definition | - |
>pfu_aug1.0_438.1_07537.t1 atgaatccaatacattcccaattggcagctttgtttttattactagtctccgtggtaaaggatacgtgggcgtgtacctg cttccccacccatgtgcaacaacactactgtatggctgatgtcgttttagttgcaacgatcaaagatgtggaggaaatat ttcagaacagtttagtcaaagccccaaatccactaatgccagacgacccttatgcacggatgcccgtggaaagaaaatac aaaataagggtccaccgattcttcaagggaaatgacaagttagataacattggaaaagctttgaaatacattcatacgtc gggatcaggagccgcttgtggagtcatcttacagaagggcaaaacctacattatatcagcacgcattcaaaggagagaag tatggacaagcatgtgtaattggatacaagactacaaaactatcaaacgtcaccagatgaaaggactcaaattccattac aagagaaattgtcattgtgaggtatcatggtgtcaggccagttattgtagcgatccaggaccgcgagaatgtcgatgggt tccaaggatgtggaatcaagattgtttccaggatcacggtttctgtatgattaataataaaaatcagtgtcaatggaaaa gaaataaaaaactaaagcagtgtctgagatacaataacattgtattcccgtggaaaaccgtacgaaaagcacctacacga gaggtatcaccagattccgagaacgaaagttcgaatgaaaggagccctgggtttggacttggtcctgaggagttcaatcc agccctagaggatagaagtccggggtatggggcccacagtcctggttataatagtcccggatctaatagccccggatatg gaggacgtgtcaatgcaagggagagattaccaagcagagtcgtagaaccttga |
Protein
Protein ID | pfu_aug1.0_438.1_07537.t1 |
---|---|
Definition | - |
>pfu_aug1.0_438.1_07537.t1 MNPIHSQLAALFLLLVSVVKDTWACTCFPTHVQQHYCMADVVLVATIKDVEEIFQNSLVKAPNPLMPDDPYARMPVERKY KIRVHRFFKGNDKLDNIGKALKYIHTSGSGAACGVILQKGKTYIISARIQRREVWTSMCNWIQDYKTIKRHQMKGLKFHY KRNCHCEVSWCQASYCSDPGPRECRWVPRMWNQDCFQDHGFCMINNKNQCQWKRNKKLKQCLRYNNIVFPWKTVRKAPTR EVSPDSENESSNERSPGFGLGPEEFNPALEDRSPGYGAHSPGYNSPGSNSPGYGGRVNARERLPSRVVEP |