Gene
Gene Model ID | pfu_aug1.0_438.1_07540 |
---|---|
Locus | scaffold438.1 : 59273 ... 67345 : - |
To GenomeBrowser | scaffold438.1:59273..67345 |
Genes list of scaffold | scaffold438.1 |
Synonym | pfu_aug2.0_371.1_04068 |
Manual annotation
Hmmer Search for Pfam
query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
---|---|---|---|---|---|---|---|---|---|---|
pfu_aug1.0_438.1_07540.t1 | 1 | 1 | DcpS | 30 | 126 | 6.6e-27 | 94.0 | 1.5e-30 | 1.1e-26 | 93.3 |
Blast Hit to nr / sp
query | Subject ID | Subject Name | evalue |
---|---|---|---|
pfu_aug1.0_438.1_07540.t1 | gi|291241392|ref|XP_002740596.1| | PREDICTED: m7GpppX diphosphatase-like [Saccoglossus kowalevskii] | 1.0e-33 |
Expression profile
(Color code: FPKM>10&<50, blue; FPKM>50, pink)Libraries | EST count |
---|---|
>Embryonic/Larval stages | |
mix | 1 |
egg-4cell | 1 |
8-16cell | 1 |
egg-Dshape | 1 |
>Adult tissues | |
maleGonad | 1 |
Transcript
Transcript ID | pfu_aug1.0_438.1_07540.t1 |
---|---|
Definition | - |
>pfu_aug1.0_438.1_07540.t1 atggagggaaaagaagaacatgtgcctctgaagaaaaggaaagtggagcaagatttcacggagaaagattttgcagagaa attacagagtttccgaggctttcagacggtgaaagtattaagagaaagtaacgcaaacaaatgtttgtttctccatggta aactaaatggacaagatgccgtcgttctcctggagaagagtccgtttgacaaagagaaagtagacgaattgatgaatgaa aacacctctttggtggagactctgaaaaacgacatatatagtacatacaccgcattccccgaaaaatcgttgaatgctgt gaaagccaccttgatccatcctgcaactcctaagcatataactaagtacactgatcaagaagcttttgttgttcatgaaa ctgaagatatctatcagagtgtaactctgccttacatagagtcacaggcttttagcatacagacgaacttttga |
Protein
Protein ID | pfu_aug1.0_438.1_07540.t1 |
---|---|
Definition | - |
>pfu_aug1.0_438.1_07540.t1 MEGKEEHVPLKKRKVEQDFTEKDFAEKLQSFRGFQTVKVLRESNANKCLFLHGKLNGQDAVVLLEKSPFDKEKVDELMNE NTSLVETLKNDIYSTYTAFPEKSLNAVKATLIHPATPKHITKYTDQEAFVVHETEDIYQSVTLPYIESQAFSIQTNF |