Gene
Gene Model ID | pfu_aug1.0_438.1_07542 |
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Locus | scaffold438.1 : 71976 ... 77926 : + |
To GenomeBrowser | scaffold438.1:71976..77926 |
Genes list of scaffold | scaffold438.1 |
Synonym | NA |
Manual annotation
Hmmer Search for Pfam
query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
---|---|---|---|---|---|---|---|---|---|---|
pfu_aug1.0_438.1_07542.t1 | 3 | 1 | Cadherin | 82 | 135 | 1.2e-36 | 124.7 | 3.5e-09 | 1.8e-05 | 24.9 |
pfu_aug1.0_438.1_07542.t1 | 3 | 2 | Cadherin | 150 | 241 | 1.2e-36 | 124.7 | 2.5e-15 | 1.2e-11 | 44.6 |
pfu_aug1.0_438.1_07542.t1 | 3 | 3 | Cadherin | 259 | 348 | 1.2e-36 | 124.7 | 4.3e-19 | 2.1e-15 | 56.7 |
Transcript
Transcript ID | pfu_aug1.0_438.1_07542.t1 |
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Definition | - |
>pfu_aug1.0_438.1_07542.t1 atgcacaccatggttttctctcatagcagaatcctgaaaagtgttttctttgtcccaattgtagttgttattcttggcac atccgctacaggaggggaaattgcgagtcttacgggtacagaccaacatttttcaaatttctacaatgtgtacgtgagtg aatttacaccattaggctctacggtgtttattttcaatgtctgtacggacagtaaagcggaccgactgacattttcggtg tctgacaaacacttcagagtcggggttcacggatgttcggcgcgtatctatacagccgtccagttggactatgaggtcag aaacaactatattcttgatataacaataacagatcacggaagtatctctcctacagataggctggtcagagtgaacatca ccgttatagacgagaatgacaacggtccacaatttgggcgtaacatttatcatgtccgtgtcttggagaatgtagaggtt gggacggttattgcgcagttgtcagcaacggatgcagactctatacatgacaatgacatacgttacaaaatattgtcgac ggtaccagttgacggtatcggtatgttcacgattgatcccgtcagagggaccgtcacaacgtcggcacctttattcagtg taacgacacggacctttaacatcacggtccaagcttacgaaagtaagactgagtttacaaccacccaactcttggttttt gtcgatgccatcaatctccatcaaccaatttttcagggaactgttaacaacacatactatattagtgtactggaaatggt acccgtcgggactgtagtaacgagggtacatgcgacagatgaggactcttcccagaacggtgaggttcattattacatgg ttcctcccatcagtccagatttacctttcagcatcagtgacgatggtacgatctccacaaaagctacactagacagaaaa acgatgaatgtgtatcaattcagagtcggagctaccgaccaaggaattcctgttcggttacacaatacagcaattgtgag gatcatctatccacgagaaccagaggtcaaaagacccctgaaagcaaaaactccgcttcatactcttttgatgattgtgg tcacttaa |
Protein
Protein ID | pfu_aug1.0_438.1_07542.t1 |
---|---|
Definition | - |
>pfu_aug1.0_438.1_07542.t1 MHTMVFSHSRILKSVFFVPIVVVILGTSATGGEIASLTGTDQHFSNFYNVYVSEFTPLGSTVFIFNVCTDSKADRLTFSV SDKHFRVGVHGCSARIYTAVQLDYEVRNNYILDITITDHGSISPTDRLVRVNITVIDENDNGPQFGRNIYHVRVLENVEV GTVIAQLSATDADSIHDNDIRYKILSTVPVDGIGMFTIDPVRGTVTTSAPLFSVTTRTFNITVQAYESKTEFTTTQLLVF VDAINLHQPIFQGTVNNTYYISVLEMVPVGTVVTRVHATDEDSSQNGEVHYYMVPPISPDLPFSISDDGTISTKATLDRK TMNVYQFRVGATDQGIPVRLHNTAIVRIIYPREPEVKRPLKAKTPLHTLLMIVVT |