Gene
Gene Model ID | pfu_aug1.0_4452.1_23577 |
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Locus | scaffold4452.1 : 1 ... 10186 : + |
To GenomeBrowser | scaffold4452.1:1..10186 |
Genes list of scaffold | scaffold4452.1 |
Synonym | pfu_aug2.0_426.1_20759 |
Manual annotation
Study field | Environmental Response |
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Gene name | latrophilin 3-like |
Description | Homology (29%) to ref|XP_002733569.1| PREDICTED: latrophilin 3-like [Saccoglossus kowalevskii] |
mRNA evidence |
Hmmer Search for Pfam
query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
---|---|---|---|---|---|---|---|---|---|---|
pfu_aug1.0_4452.1_23577.t1 | 1 | 1 | GPS | 248 | 294 | 1.1e-11 | 44.6 | 3.4e-15 | 1.7e-11 | 44.0 |
pfu_aug1.0_4452.1_23577.t1 | 1 | 1 | 7tm_2 | 326 | 532 | 3.09995e-41 | 141.0 | 3.60134e-43 | 1.8e-39 | 135.3 |
Blast Hit to nr / sp
query | Subject ID | Subject Name | evalue |
---|---|---|---|
pfu_aug1.0_4452.1_23577.t1 | gi|291227191|ref|XP_002733569.1| | 0.0 |
Transcript
Transcript ID | pfu_aug1.0_4452.1_23577.t1 |
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Definition | - |
>pfu_aug1.0_4452.1_23577.t1 ataaatcaatgaatgccgatgccatggcggaggctctgtataacatatccctgggggctagggatctgacagtggaggaa ttaaggagaatcatcgtgatactggagtccctggtagctttgaagggatccctgctccaggggcggagacagtatcatat ggtaggggtgctcagtaacctgtattataccagggaacgggtcctactggatggagaaatcaagtataggacatcgtcaa gataccttaaaatagtgaacaagttgatagatgagacggacatagcggatggtgacatgatggttatacaccctaacact ggtctgttgtcagttaatgtcaacatcaataattataatggtacactgttatctgtcaagtcctcatccaccgaatcatt gtcaaaatctatgatacgagttgacggagacaaaaatatcaagttacaaggcgcgtcagccgtgaatatccctccctctg caattatggaagcaaagccggtatcaaataagaatccgaatgataaaagagttgccctggctattcacaaagactcaacc attatagagccaatcagacgagctagggggccatgggcattgatgaaggaatcccgtataaaagctgcccgtcagcgcgt ggttaacagcgccattttcaatgtacgggtacccggatatcaggtgtcaaatctcactgatcccgtcaaattcagattcc aacctataactgagaatggggacaatgcctcgtgtgaatttttcgtcgatcctgaatccatggcgggcggctggtcacgt gccggatgtcatgtgacgtcactcaagaaaggagaatatgtggaatgttcctgcaatcaccttacaaacttcgcactcat aatggatgtgtatggtgttggagagaagctaagcgttacccataggagagccatgtcgtacatatcatacctcggttgtg cgctgtctctccttgcactcctactcaccctccttacctacatgatgtttagtatagcagcatctaacatagtgttcttg attggtgaacaggaatatagtctacaagacgaaactggatgcaagattgtagcagcacttttacatttctgcctcctgtg ttctataagttggatgtcaatagagggattctacatgtacaaagctctggttaaagtcttcaacactcacttctcatact tcttacttaaaacatgccttgttggatacggtgtacctctcctaattgtaatcatcacagcaggtgtcaataaaaccagt aactatggttaccagccaggtgacatctgctggctgtcaacaaatgcctttttcggagcatttctggcccctgtgtgtgc catgttgattttcaacttcatagtctttgttcttgtcttgagaaaaataatggggaattctggtaaaaagttaaataaat ctgacaagactagaacttcacagcgcttgcgcagagcattcactttggtgtcactgttcggactaacgtggacttttgct gtattcgccacggacggagcaggaattattttccaataccttttcgctatttcaaattcacttcaaggatttttcatttt cattttcaacatattactgaacaaagcagccattttacaatggaagatgaagcttcttggtcgtggtgaggaggtgtcca aactgacatcaagaaaagaatccaccacaagagaaactatttcatga |
Protein
Protein ID | pfu_aug1.0_4452.1_23577.t1 |
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Definition | - |
>pfu_aug1.0_4452.1_23577.t1 KSMNADAMAEALYNISLGARDLTVEELRRIIVILESLVALKGSLLQGRRQYHMVGVLSNLYYTRERVLLDGEIKYRTSSR YLKIVNKLIDETDIADGDMMVIHPNTGLLSVNVNINNYNGTLLSVKSSSTESLSKSMIRVDGDKNIKLQGASAVNIPPSA IMEAKPVSNKNPNDKRVALAIHKDSTIIEPIRRARGPWALMKESRIKAARQRVVNSAIFNVRVPGYQVSNLTDPVKFRFQ PITENGDNASCEFFVDPESMAGGWSRAGCHVTSLKKGEYVECSCNHLTNFALIMDVYGVGEKLSVTHRRAMSYISYLGCA LSLLALLLTLLTYMMFSIAASNIVFLIGEQEYSLQDETGCKIVAALLHFCLLCSISWMSIEGFYMYKALVKVFNTHFSYF LLKTCLVGYGVPLLIVIITAGVNKTSNYGYQPGDICWLSTNAFFGAFLAPVCAMLIFNFIVFVLVLRKIMGNSGKKLNKS DKTRTSQRLRRAFTLVSLFGLTWTFAVFATDGAGIIFQYLFAISNSLQGFFIFIFNILLNKAAILQWKMKLLGRGEEVSK LTSRKESTTRETIS |