Gene
Gene Model ID | pfu_aug1.0_4475.1_59525 |
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Locus | scaffold4475.1 : 22306 ... 41617 : + |
To GenomeBrowser | scaffold4475.1:22306..41617 |
Genes list of scaffold | scaffold4475.1 |
Synonym | pfu_aug2.0_107.1_23474 |
Manual annotation
Study field | signal molecules |
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Gene name | serine/threonine-protein kinase |
Description | NCBI BlastP top hit to Acromyrmex echinatior putative serine/threonine-protein kinase C05D10.2 |
mRNA evidence |
Hmmer Search for Pfam
query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
---|---|---|---|---|---|---|---|---|---|---|
pfu_aug1.0_4475.1_59525.t1 | 2 | 1 | Pkinase | 26 | 128 | 3.5e-33 | 114.8 | 7.6e-32 | 3.8e-28 | 98.3 |
pfu_aug1.0_4475.1_59525.t1 | 1 | 1 | Pkinase_Tyr | 29 | 131 | 5.8e-14 | 51.7 | 1.9e-17 | 9.3e-14 | 51.1 |
pfu_aug1.0_4475.1_59525.t1 | 2 | 2 | Pkinase | 140 | 170 | 3.5e-33 | 114.8 | 1.5e-06 | 0.0072 | 15.5 |
Blast Hit to nr / sp
query | Subject ID | Subject Name | evalue |
---|---|---|---|
pfu_aug1.0_4475.1_59525.t1 | gi|332022413|gb|EGI62721.1| | Putative serine/threonine-protein kinase C05D10.2, partial [Acromyrmex echinatior] | 0.0 |
Transcript
Transcript ID | pfu_aug1.0_4475.1_59525.t1 |
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Definition | - |
>pfu_aug1.0_4475.1_59525.t1 atgaatgacataactgttcttattgatcttgtatttcgagatactgatgaactaaggagatttgatctcatttttacaga aacagatttacataacgtaatcaaacgaggaagtatactgaaggatgtacataaacgctatattatgtatcagatgttca aagccactaagtacctccattctggcaatgtgatacacagagatcagaagccatctaatatactgctggacagtgagtgt gtagttaaggtgtgtgactttggtttagcgagatcattaacacagataggagtggacgcggagacgggtgacccaaacct gacagaatatgtagccacacgctggtacagggcaccagaaatacttctgggatctcatagatcaaagaagtctatagagg acttgttacctgatgcccctaaggacggtgttgacctgttacggaggttgatacagtttaatcctgacaaacgaatcacc gcagatgaggctttaagacatccttttgtatcaaggtttcacaatgctgcagaggagatatcattgaactatgatgttgt acctccactaagtgacgatgtacaactaacagtagaagaatacagaaataaattatatgaggttccaggacagcgtcctg tatcagccacatcagctcagaaacaaaaaccaatctacggccgtaaacagttcaacaatgcaataaacaacccatcacat ggtgcccctaaagcttactttggtagctacactcagaatgtagggacaatttcatcgtctgccttagcttctatacaagg taaaaagtcgtga |
Protein
Protein ID | pfu_aug1.0_4475.1_59525.t1 |
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Definition | - |
>pfu_aug1.0_4475.1_59525.t1 MNDITVLIDLVFRDTDELRRFDLIFTETDLHNVIKRGSILKDVHKRYIMYQMFKATKYLHSGNVIHRDQKPSNILLDSEC VVKVCDFGLARSLTQIGVDAETGDPNLTEYVATRWYRAPEILLGSHRSKKSIEDLLPDAPKDGVDLLRRLIQFNPDKRIT ADEALRHPFVSRFHNAAEEISLNYDVVPPLSDDVQLTVEEYRNKLYEVPGQRPVSATSAQKQKPIYGRKQFNNAINNPSH GAPKAYFGSYTQNVGTISSSALASIQGKKS |