Gene
Gene Model ID | pfu_aug1.0_5215.1_45144 |
---|---|
Locus | scaffold5215.1 : 94504 ... 100885 : - |
To GenomeBrowser | scaffold5215.1:94504..100885 |
Genes list of scaffold | scaffold5215.1 |
Synonym | pfu_aug2.0_38.1_26718 |
Manual annotation
Study field | Reproduction |
---|---|
Gene name | Pifuc-IR-like |
Description | Reciprocal BLASTP best hit to NCBI Accession NP_001116701 (Danio rerio). L1 domain of the insulin/IGF receptor like protein. |
mRNA evidence |
Hmmer Search for Pfam
query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
---|---|---|---|---|---|---|---|---|---|---|
pfu_aug1.0_5215.1_45144.t1 | 2 | 1 | Recep_L_domain | 17 | 33 | 5.7e-26 | 90.6 | 0.76 | 5600.0 | -2.7 |
pfu_aug1.0_5215.1_45144.t1 | 2 | 2 | Recep_L_domain | 73 | 184 | 5.7e-26 | 90.6 | 1.9e-29 | 1.4e-25 | 89.3 |
Blast Hit to nr / sp
query | Subject ID | Subject Name | evalue |
---|---|---|---|
pfu_aug1.0_5215.1_45144.t1 | gi|291241296|ref|XP_002740550.1| | 0.0 |
Transcript
Transcript ID | pfu_aug1.0_5215.1_45144.t1 |
---|---|
Definition | - |
>pfu_aug1.0_5215.1_45144.t1 atgttaaagttatcaaaaattgaatttttatttctttataaagatctactcttgcttcatattattgcttcgcccgaatt gtcgagtatacgaagcgatgcaagggtcggaatattaagtcattcatgttttaagatctataaacatgttcttagatgac tgatatgtggagacatcgatataagaaatgatgtgaaatattttagtcagctagaaaactgcacggttatagaaggacac ctccagattctgttaatagagggcgccactcaggaacaatatcaacaattagagtttcctgatctagtagaaattaccga ttatttccttcttttccgggtttatggtcttaaaactctcagtcacattttccccaatttgtctgttatacgaggacaga gactgttcttcgactttgctctggtagcctacgagatgatggacttggaagagctaggtttatggggtctaacttctata gagagaggcgctgtccgattggaaaagaatcctttgctttgctacattgacaccgtggattggaccaaaatagcagtagg catcaaagaatcatctgatcatttctttaaagagaacaaagacgtacgggaatgtgtcaacatgtgtcctcgaaactgta cggaaacaactttggacaaccgtaaagcaaggagatgctggactctcaaacactgccaaaggatactaagtaagcactct tatacttcacaatataaacgcatgggcggatcaaaaagaaattaa |
Protein
Protein ID | pfu_aug1.0_5215.1_45144.t1 |
---|---|
Definition | - |
>pfu_aug1.0_5215.1_45144.t1 MLKLSKIEFLFLYKDLLLLHIIASPELSSIRSDARVGILSHSCFKIYKHVLRXLICGDIDIRNDVKYFSQLENCTVIEGH LQILLIEGATQEQYQQLEFPDLVEITDYFLLFRVYGLKTLSHIFPNLSVIRGQRLFFDFALVAYEMMDLEELGLWGLTSI ERGAVRLEKNPLLCYIDTVDWTKIAVGIKESSDHFFKENKDVRECVNMCPRNCTETTLDNRKARRCWTLKHCQRILSKHS YTSQYKRMGGSKRN |