Gene
Gene Model ID | pfu_aug1.0_5662.1_23858 |
---|---|
Locus | scaffold5662.1 : 46276 ... 50289 : + |
To GenomeBrowser | scaffold5662.1:46276..50289 |
Genes list of scaffold | scaffold5662.1 |
Synonym | pfu_aug2.0_528.1_27509 |
Manual annotation
Study field | Transcription Factors |
---|---|
Gene name | fork head box protein F-like |
Description | Reciprocal BLASTP best hit to NCBI Accession CBI70345.1, fork head box protein F (Patella vulgata). |
mRNA evidence |
Hmmer Search for Pfam
query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
---|---|---|---|---|---|---|---|---|---|---|
pfu_aug1.0_5662.1_23858.t1 | 1 | 1 | Fork_head | 71 | 163 | 3.9e-38 | 129.3 | 5.4006e-42 | 8.0e-38 | 128.3 |
Blast Hit to nr / sp
query | Subject ID | Subject Name | evalue |
---|---|---|---|
pfu_aug1.0_5662.1_23858.t1 | gi|274133304|emb|CBI70345.1| | forkhead box F protein [Patella vulgata] | 0.0 |
Transcript
Transcript ID | pfu_aug1.0_5662.1_23858.t1 |
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Definition | - |
>pfu_aug1.0_5662.1_23858.t1 atgactaccgagttagagctattgcaggatgttgaaaggaaagttgttccaaaatctgagccaggattttctgatgaaag tgcagcatcagacgatgatgacgaggaatcagccgaggactcgcagacgacacctcagccaaatccggaatcgccaacaa caggacagaaaaatccaaagaaatctggagttggtgtgagaaggcaggagaagccaccctattcttatattgccctcatc gtcatggcaattcaggctacacccaacaaaagatgcaccctcagtgaaatttatcagtttctgcagcagagatttccgtt tttccggggatcgtaccaaggatggaagaactcagtgcggcacaacctctccttaaacgagtgctttattaaattaccaa aaggacttggaaggccgggaaaaggacactattggaccattgatccggctgcagaattcatgttcgaggagggatctttc cgcagacgaccgcgtggtttccggcggaaatgtcaggcattaaagcccttcggaatgctcgggatcaatggtatgggaag tggacagtcgatgatcggatctcattatgacttgttccaaaatacaaatatgtcgtctatgaatatgcagtgctccggga acaccacacaaacctacgacaacacgggaatgatgcagcagaactcaaccctccaccactctaacttttcaccgatgcct caacacaatcagaatttgaattgcagttttaacatgacaatgaatggtcgatatggaccaagctgtgctttatcaggact agagggtgactacgtacagtcccccgcaccaaacactttacctgtgtacgatagagaccattattggtccgctcaaagat actcaaatatgacaaaacaacagacattgagtccggcagggagtacgggatcgattccgagcatttcaccagcaagttcc ggcgaccactctccttacgggtccaatattgtgacgacctcagaaccaatggacttagctttagctggtgggtacacttt ttaa |
Protein
Protein ID | pfu_aug1.0_5662.1_23858.t1 |
---|---|
Definition | - |
>pfu_aug1.0_5662.1_23858.t1 MTTELELLQDVERKVVPKSEPGFSDESAASDDDDEESAEDSQTTPQPNPESPTTGQKNPKKSGVGVRRQEKPPYSYIALI VMAIQATPNKRCTLSEIYQFLQQRFPFFRGSYQGWKNSVRHNLSLNECFIKLPKGLGRPGKGHYWTIDPAAEFMFEEGSF RRRPRGFRRKCQALKPFGMLGINGMGSGQSMIGSHYDLFQNTNMSSMNMQCSGNTTQTYDNTGMMQQNSTLHHSNFSPMP QHNQNLNCSFNMTMNGRYGPSCALSGLEGDYVQSPAPNTLPVYDRDHYWSAQRYSNMTKQQTLSPAGSTGSIPSISPASS GDHSPYGSNIVTTSEPMDLALAGGYTF |