Gene
Gene Model ID | pfu_aug1.0_5668.1_31018 |
---|---|
Locus | scaffold5668.1 : 93429 ... 106955 : - |
To GenomeBrowser | scaffold5668.1:93429..106955 |
Genes list of scaffold | scaffold5668.1 |
Synonym | pfu_aug2.0_64.1_13522 |
Manual annotation
Study field | Biomineralization |
---|---|
Gene name | TEF1 like |
Description | BLASTP best hit to NCBI Accession XP_001601555 |
mRNA evidence |
Hmmer Search for Pfam
query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
---|---|---|---|---|---|---|---|---|---|---|
pfu_aug1.0_5668.1_31018.t1 | 2 | 1 | TEA | 21 | 115 | 0.0 | 439.1 | 0.0 | 0.0 | 176.5 |
pfu_aug1.0_5668.1_31018.t1 | 2 | 2 | TEA | 113 | 277 | 0.0 | 439.1 | 0.0 | 0.0 | 266.0 |
Blast Hit to nr / sp
query | Subject ID | Subject Name | evalue |
---|---|---|---|
pfu_aug1.0_5668.1_31018.t1 | gi|148690876|gb|EDL22823.1| | TEA domain family member 2, isoform CRA_c [Mus musculus] | 0.0 |
Transcript
Transcript ID | pfu_aug1.0_5668.1_31018.t1 |
---|---|
Definition | - |
>pfu_aug1.0_5668.1_31018.t1 atgtcttccacctggacaaatccagataacctgggtccggacacactgaagggggaccctgaaagtccagaaaataacaa taatgacgacctgtctaacgatgctgagggcgtgtggagtcccgacatcgaacagagcttccaagaggcacttgccatat atcctccttgtgggaggaggaaaattatcctgtctgacgagggcaaaatgtatggtagaaatgaattgatagcgagatac atcaaactccgaacaggaaaaagtcgctctagaaagcaagtttctagtcatattcaagtattggctcgtcgtaaatccaa agaaattcaagcgcagctcaaggccatcgatattcggcaaatttacgataaatttcctgagaagaaaggaggattaaaag agttgtacgataaaggacctcaatcagctttcttccttgtaaaattctgggcagatattaacactaatgttcaagatgaa gctggggcattttacggtgttacaagccaatacgagagtacggagaatatgactatcacctgctccaccaaagtgtgttc atttggtaaacaagtcgtggaaaaagtagagacggagtatccacgttttgagaacggacgatacgtatacagaatacatc gatcacccatgtgtgaatatatgatcaactttatccacaaacttaaacatctacctgaaaagtatatgatgaacagtgta ttggaaaacttcacaattctacaggtggtgagtaacagagacacgcaagagacattactttgtgttgcgtatgtgtttga agtatcaacgagcgagcatggagcacaacatcacatctatcgtttagtgaaggactag |
Protein
Protein ID | pfu_aug1.0_5668.1_31018.t1 |
---|---|
Definition | - |
>pfu_aug1.0_5668.1_31018.t1 MSSTWTNPDNLGPDTLKGDPESPENNNNDDLSNDAEGVWSPDIEQSFQEALAIYPPCGRRKIILSDEGKMYGRNELIARY IKLRTGKSRSRKQVSSHIQVLARRKSKEIQAQLKAIDIRQIYDKFPEKKGGLKELYDKGPQSAFFLVKFWADINTNVQDE AGAFYGVTSQYESTENMTITCSTKVCSFGKQVVEKVETEYPRFENGRYVYRIHRSPMCEYMINFIHKLKHLPEKYMMNSV LENFTILQVVSNRDTQETLLCVAYVFEVSTSEHGAQHHIYRLVKD |