Gene
Gene Model ID | pfu_aug1.0_579791.1_57830 |
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Locus | scaffold579791.1 : 20 ... 237 : + |
To GenomeBrowser | scaffold579791.1:20..237 |
Genes list of scaffold | scaffold579791.1 |
Synonym | NA |
Manual annotation
Study field | 20 basic cell biology |
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Gene name | ubiquitin |
Description | Identify to XP_002764220.1| PREDICTED: ubiquitin-like, partial [Callithrix jacchus |
mRNA evidence |
Hmmer Search for Pfam
query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
---|---|---|---|---|---|---|---|---|---|---|
pfu_aug1.0_579791.1_57830.t1 | 1 | 1 | Rad60-SLD | 1 | 71 | 2.5e-21 | 75.1 | 1.5e-24 | 2.7e-21 | 75.0 |
pfu_aug1.0_579791.1_57830.t1 | 1 | 1 | ubiquitin | 6 | 72 | 2.0e-35 | 120.0 | 1.2e-38 | 2.2e-35 | 119.8 |
pfu_aug1.0_579791.1_57830.t1 | 1 | 1 | Ubiquitin_2 | 11 | 69 | 2.9e-07 | 30.6 | 6.3e-10 | 1.2e-06 | 28.7 |
Blast Hit to nr / sp
query | Subject ID | Subject Name | evalue |
---|---|---|---|
pfu_aug1.0_579791.1_57830.t1 | gi|312371071|gb|EFR19336.1| | 2.0e-34 |
Transcript
Transcript ID | pfu_aug1.0_579791.1_57830.t1 |
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Definition | - |
>pfu_aug1.0_579791.1_57830.t1 atgcagatttttgtgaagaccctgacaggcaagaccatcaccttggaagtagaaccctctgacaccattgagaatgtcaa ggccaagatccaggataaggagggaattcccccagaccaacagagattgatctttgctggtaaacagttggaggacggaa gaacactgtcagactataacatccagaaggagtccacactccatcttgtacttcgtct |
Protein
Protein ID | pfu_aug1.0_579791.1_57830.t1 |
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Definition | - |
>pfu_aug1.0_579791.1_57830.t1 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR |