Gene
Gene Model ID | pfu_aug1.0_5798.1_38214 |
---|---|
Locus | scaffold5798.1 : 67695 ... 71985 : - |
To GenomeBrowser | scaffold5798.1:67695..71985 |
Genes list of scaffold | scaffold5798.1 |
Synonym | pfu_aug2.0_540.1_00859 |
Manual annotation
Study field | Biomineralization |
---|---|
Gene name | tyrosinase-like protein 15 |
Description | NCBI BLASTP best hit to ACF25906 |
mRNA evidence |
Hmmer Search for Pfam
query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
---|---|---|---|---|---|---|---|---|---|---|
pfu_aug1.0_5798.1_38214.t1 | 2 | 1 | Tyrosinase | 27 | 186 | 1.1e-21 | 78.0 | 7.7e-26 | 1.1e-21 | 77.9 |
pfu_aug1.0_5798.1_38214.t1 | 2 | 2 | Tyrosinase | 309 | 332 | 1.1e-21 | 78.0 | 0.12 | 1800.0 | -1.2 |
Expression profile
(Color code: FPKM>10&<50, blue; FPKM>50, pink)Libraries | EST count |
---|---|
>Embryonic/Larval stages | |
mix | 1 |
>Adult tissues | |
mantle | 1 |
Transcript
Transcript ID | pfu_aug1.0_5798.1_38214.t1 |
---|---|
Definition | - |
>pfu_aug1.0_5798.1_38214.t1 ataccaggttctaatagcaacaagtacgataccattgccaacatcatacgatccaatcctaactccacgatggacggacc aggatttctcggctttaacagggcgtatatagagttatttgagagggccttacaggagttgatacccgacgtgacggtac cctactgggattctaccaaggatttctacatggacgaccccaaagaatcagtcttatggacatggatgttcttcggtgat ggtaacggctttgtcagcgagggaccgttcgctaactggacagacgaaaatgggggacgattgttccgcgaagtaggcga gaatccctccagtttattcaccttacatggtctggaggcaatcttagcccgcaaaaaccattatatgatcacattaccac aacctacagacctgaccaaacgatttaccatagagggacaacaaaatggtgtccacgcatgggtgggtggccagatgcgc attcgggagctgtccgcgcaggaccccgttttcttcatgcatagagccttcgtggattatatatggaataccttcataga aaagtcaggggtggatcctggcagtgattatccaattaagggtggagatgctaacaaaccagaaaatacgatgcattact tttcacagaacaccaatagggacggatacaagctggattctttgtacatagattccccccaatgcaactccacgcacaag agctgtgggtcggtgtggttgaaatgcacgtacttttggaagccctttaagaagcatttatgtgtctctgttacacgggc ctttgctgatattaaacccagtccgccaacgctagataaagtacctaaactttcaggtacaccttataacgtggtctttg tcgacattcgcacaaaacaacttaagagaacaaaacaactgaagaaaatctcaaaaaatcgggtaacagacatgcaaaac ccgccgccacaaaacaataccaccaaccaagctcaaaacactataacaaacgaaaagattaatgcgtcaattaattga |
Protein
Protein ID | pfu_aug1.0_5798.1_38214.t1 |
---|---|
Definition | - |
>pfu_aug1.0_5798.1_38214.t1 IPGSNSNKYDTIANIIRSNPNSTMDGPGFLGFNRAYIELFERALQELIPDVTVPYWDSTKDFYMDDPKESVLWTWMFFGD GNGFVSEGPFANWTDENGGRLFREVGENPSSLFTLHGLEAILARKNHYMITLPQPTDLTKRFTIEGQQNGVHAWVGGQMR IRELSAQDPVFFMHRAFVDYIWNTFIEKSGVDPGSDYPIKGGDANKPENTMHYFSQNTNRDGYKLDSLYIDSPQCNSTHK SCGSVWLKCTYFWKPFKKHLCVSVTRAFADIKPSPPTLDKVPKLSGTPYNVVFVDIRTKQLKRTKQLKKISKNRVTDMQN PPPQNNTTNQAQNTITNEKINASIN |