Gene
Gene Model ID | pfu_aug1.0_5836.1_45304 |
---|---|
Locus | scaffold5836.1 : 29146 ... 45335 : + |
To GenomeBrowser | scaffold5836.1:29146..45335 |
Genes list of scaffold | scaffold5836.1 |
Synonym | pfu_aug2.0_842.1_07943 |
Manual annotation
Study field | Metabolism |
---|---|
Gene name | UDP-glucose 4-epimerase |
Hmmer Search for Pfam
query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
---|---|---|---|---|---|---|---|---|---|---|
pfu_aug1.0_5836.1_45304.t1 | 1 | 1 | Epimerase | 8 | 152 | 4.3e-24 | 85.2 | 4.0e-28 | 5.9e-24 | 84.8 |
Blast Hit to nr / sp
query | Subject ID | Subject Name | evalue |
---|---|---|---|
pfu_aug1.0_5836.1_45304.t1 | gi|326933174|ref|XP_003212683.1| | 0.0 |
Transcript
Transcript ID | pfu_aug1.0_5836.1_45304.t1 |
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Definition | - |
>pfu_aug1.0_5836.1_45304.t1 atggaggaattgttttctaaggtgatgaaggcttacggtgtgaagaatttactgttctccagttcatgtactgtctatgg caagtcccagtacttacctttggatgagaaacatccactgggggcttgtacaaacccatacggtagatcaaaatacttca ttgaagaaattctcaaagatcttacaaaatcagaaccgggatggaatattatttgtctccgttacttcaatccaattgga gctcatgagtcgggtagaattggagaagacccaaccggagtaccacataaccttgtgccattcattacccaagtggcagt gggtagaagacgggagcttaatgtatatggctttgattatgatacacctgatgggacatgtataagggactacatacacg ttgtagacttagccaaaggccacttggccgcgcaacgaaaaacacaaacaaattgtggcttcaagaagaaaatgacaatc ggtagcaaactgtgtgttgctgacatgattgatgatatttggttaaatggaaatagaccctttcacattatctgcggtac tgaatttgaatgccagttcccggggacaacgaatagattgcgcatgcaccagtga |
Protein
Protein ID | pfu_aug1.0_5836.1_45304.t1 |
---|---|
Definition | - |
>pfu_aug1.0_5836.1_45304.t1 MEELFSKVMKAYGVKNLLFSSSCTVYGKSQYLPLDEKHPLGACTNPYGRSKYFIEEILKDLTKSEPGWNIICLRYFNPIG AHESGRIGEDPTGVPHNLVPFITQVAVGRRRELNVYGFDYDTPDGTCIRDYIHVVDLAKGHLAAQRKTQTNCGFKKKMTI GSKLCVADMIDDIWLNGNRPFHIICGTEFECQFPGTTNRLRMHQ |