Gene
Gene Model ID | pfu_aug1.0_590429.1_65134 |
---|---|
Locus | scaffold590429.1 : 1 ... 228 : - |
To GenomeBrowser | scaffold590429.1:1..228 |
Genes list of scaffold | scaffold590429.1 |
Synonym | NA |
Manual annotation
Study field | structural proteins |
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Gene name | paramyosin |
Description | Paramyosin partial sequence. BLASTP top hit to AB016070 (Mytilus galloprovincialis). |
mRNA evidence |
Hmmer Search for Pfam
query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
---|---|---|---|---|---|---|---|---|---|---|
pfu_aug1.0_590429.1_65134.t1 | 1 | 1 | Myosin_tail_1 | 2 | 75 | 1.7e-16 | 59.1 | 9.0e-19 | 1.9e-16 | 59.0 |
Expression profile
(Color code: FPKM>10&<50, blue; FPKM>50, pink)Libraries | EST count |
---|---|
>Embryonic/Larval stages | |
mix | 1 |
>Adult tissues |
Transcript
Transcript ID | pfu_aug1.0_590429.1_65134.t1 |
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Definition | - |
>pfu_aug1.0_590429.1_65134.t1 ggctcatgcagaatctaaagttgatgccctcgagggctccctggccagactgaaggcccaggtcgatgacctcacccgtc aacttaacgatgctaacaacgccaaggctagactcactcaggaaaatttcgatcttcaacaccaagtccaggagcttgat agtgccaatgcaggtctggcaaaggctaaatctcaactccagctacaattagatgacctcaagaggaa |
Protein
Protein ID | pfu_aug1.0_590429.1_65134.t1 |
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Definition | - |
>pfu_aug1.0_590429.1_65134.t1 AHAESKVDALEGSLARLKAQVDDLTRQLNDANNAKARLTQENFDLQHQVQELDSANAGLAKAKSQLQLQLDDLKR |