Gene
Gene Model ID | pfu_aug1.0_5987.1_23925 |
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Locus | scaffold5987.1 : 9936 ... 14284 : + |
To GenomeBrowser | scaffold5987.1:9936..14284 |
Genes list of scaffold | scaffold5987.1 |
Synonym | pfu_aug2.0_149.1_30292 |
Manual annotation
Study field | Reproduction |
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Gene name | C1q domain containing protein |
Description | Best hit to FR715615 (MgC1q36). 77 bits, 3e-12 |
mRNA evidence |
Hmmer Search for Pfam
query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
---|---|---|---|---|---|---|---|---|---|---|
pfu_aug1.0_5987.1_23925.t1 | 1 | 1 | C1q | 151 | 264 | 2.4e-21 | 76.0 | 2.0e-24 | 5.9e-21 | 74.7 |
Transcript
Transcript ID | pfu_aug1.0_5987.1_23925.t1 |
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Definition | - |
>pfu_aug1.0_5987.1_23925.t1 atgagtaaggaaaataaaattttgagcgaaaatattcgaagtctacaaacagaaaatcaacacttccgaaaaactattat tttcctaacagaaaaatgtcagagagttgaattagatcttgaagagttgaaaaggagcaaagttgacatgaaatcagaaa cagaacaagaacatgatgatattgactcaggaaccggaaaccaacagagcagtgcaaatttccaaaattattctagtgct gtgaagtcaggaaatatttcagaattagtatctaaaatggacacaaatgacaacaaaagcatggatagaagaagttcact gatacgagctcatggatcttatcctgatgatatttttataactgtaccaacaaatccgactgtaacaataaagccacaaa agattggattccttgcttataatccacggagtcaacttgatctcaggattcaccggactgttcaatttcccacagctctt acaaatgaaggatcagcatataaccctagtagtagcatttttaaggctccagtcgatggtctgtactttttctctgtaac tattctaagtttacacggagaagacatggaagcagaaatcgtgctcaatggtaacggaaaggtttacacgtactctggcg gggagaccaccatgtatggctctggatcaacatcagcggtccttcaactccatgcaaacgacgatgtctggataaggatt ctgaacaacaaagtagaaaatgatggcattatcagagtgcacggagacagatggtcctccttctgtggattcaagatagc atag |
Protein
Protein ID | pfu_aug1.0_5987.1_23925.t1 |
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Definition | - |
>pfu_aug1.0_5987.1_23925.t1 MSKENKILSENIRSLQTENQHFRKTIIFLTEKCQRVELDLEELKRSKVDMKSETEQEHDDIDSGTGNQQSSANFQNYSSA VKSGNISELVSKMDTNDNKSMDRRSSLIRAHGSYPDDIFITVPTNPTVTIKPQKIGFLAYNPRSQLDLRIHRTVQFPTAL TNEGSAYNPSSSIFKAPVDGLYFFSVTILSLHGEDMEAEIVLNGNGKVYTYSGGETTMYGSGSTSAVLQLHANDDVWIRI LNNKVENDGIIRVHGDRWSSFCGFKIA |