Gene
Gene Model ID | pfu_aug1.0_6626.1_67487 |
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Locus | scaffold6626.1 : 18356 ... 42237 : + |
To GenomeBrowser | scaffold6626.1:18356..42237 |
Genes list of scaffold | scaffold6626.1 |
Synonym | pfu_aug2.0_91.1_03591 |
Manual annotation
Study field | Reproduction |
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Gene name | Pifuc-calcineurin A |
Description | Gapped, not 100% match with EU797510 (P. fucata). |
mRNA evidence |
Hmmer Search for Pfam
query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
---|---|---|---|---|---|---|---|---|---|---|
pfu_aug1.0_6626.1_67487.t1 | 1 | 1 | Metallophos | 198 | 241 | 2.2e-11 | 43.5 | 3.7e-15 | 5.5e-11 | 42.2 |
Blast Hit to nr / sp
query | Subject ID | Subject Name | evalue |
---|---|---|---|
pfu_aug1.0_6626.1_67487.t1 | gi|344235863|gb|EGV91966.1| | Vinexin, partial [Cricetulus griseus] | 0.0 |
Transcript
Transcript ID | pfu_aug1.0_6626.1_67487.t1 |
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Definition | - |
>pfu_aug1.0_6626.1_67487.t1 atgacgggctccaaacctcgtatgaggagacaggaccctgaccacctgtcctctctgaaagttggtcgaactcctctgct gattgtatacatgagctcgctccagtcggcagagcacggactgtttttcttacacccttatgcttttgatacccatttta caaattcaaccgtttataaattaggcacatgctgtttgctgtcgtgtttgtgtcgttatcttacagtgaggatgatgttc tacacaacaattgttcgttattcgagaccgttgggtgatactaccggacaagtggaagggttgtgcgcacatgtttcgtt tcccccaagtcaccgtctttctatgaatgaagtttttgatgccaaaggtaaacctcgtcctgatgaattaaagaaacact tcatactcgaaggacgtgttacagaggatgtagctttacgaattataaatgaaggagcagctcttttacggcaagagaaa acaatgattgatattgaggcacctgttacagcaaagcgtcacttaaggatcattatgtctgtccgtctgtctcacaattc ggtccgtctgtcaaagccagaattagtaagcttttgtggagacattcatggccaattttatgaccttatgaaattatttg aggttggaggacctccctcaacaactcgctacctcttcctaggagattatgtggacaggggctactttagcatagaattg gacagattcaaagaacctccagcatttggtccaatgtgtgacctattatggtctgatccactagaagactttggtacaga gaaaacatcagaacattttactcataatagtgttagaggttgctcatatttttatagctacagaatgtataggaaaagtc agactacgggattcccatctctcatcactattttctcagcaccgaattatttagatgtatacaataataaagctgccata ttaaagtatgaaaacaatgtgatgaatattcgtcaattcaactgttcaccacatccatactggctaccaaacttcatgga tgtcttcacatggtctttaccgtttgtaggagaaaaagtgacagagatgctcgtgaatgtgttaaatatatgcacagatg aagagttagtcacagaggaagatgaagcattagaagctcttagtggattttctccctctcataagattagtggatttgag gaggccaagtgtttggacaagatgaatgaaagaatgcctcctagaaaagatgcattgaacaattcccatagctaa |
Protein
Protein ID | pfu_aug1.0_6626.1_67487.t1 |
---|---|
Definition | - |
>pfu_aug1.0_6626.1_67487.t1 MTGSKPRMRRQDPDHLSSLKVGRTPLLIVYMSSLQSAEHGLFFLHPYAFDTHFTNSTVYKLGTCCLLSCLCRYLTVRMMF YTTIVRYSRPLGDTTGQVEGLCAHVSFPPSHRLSMNEVFDAKGKPRPDELKKHFILEGRVTEDVALRIINEGAALLRQEK TMIDIEAPVTAKRHLRIIMSVRLSHNSVRLSKPELVSFCGDIHGQFYDLMKLFEVGGPPSTTRYLFLGDYVDRGYFSIEL DRFKEPPAFGPMCDLLWSDPLEDFGTEKTSEHFTHNSVRGCSYFYSYRMYRKSQTTGFPSLITIFSAPNYLDVYNNKAAI LKYENNVMNIRQFNCSPHPYWLPNFMDVFTWSLPFVGEKVTEMLVNVLNICTDEELVTEEDEALEALSGFSPSHKISGFE EAKCLDKMNERMPPRKDALNNSHS |