Gene
Gene Model ID | pfu_aug1.0_6762.1_60098 |
---|---|
Locus | scaffold6762.1 : 23286 ... 31879 : + |
To GenomeBrowser | scaffold6762.1:23286..31879 |
Genes list of scaffold | scaffold6762.1 |
Synonym | pfu_aug2.0_7871.1_06315 |
Manual annotation
Study field | Biomineralization |
---|---|
Gene name | Pfu-002138-2 |
Description | NCBI blastx best hit to AAZ76260.1. |
mRNA evidence |
Study field | Biomineralization |
---|---|
Gene name | 002138-1 |
Description | calcium binding |
mRNA evidence |
Hmmer Search for Pfam
query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
---|---|---|---|---|---|---|---|---|---|---|
pfu_aug1.0_6762.1_60098.t1 | 1 | 1 | EF-hand_7 | 148 | 199 | 1.0e-06 | 28.7 | 6.1e-10 | 1.8e-06 | 27.9 |
Expression profile
(Color code: FPKM>10&<50, blue; FPKM>50, pink)Libraries | EST count |
---|---|
>Embryonic/Larval stages | |
mix | 1 |
>Adult tissues | |
mantle | 1 |
mantleEdge | 1 |
mantlePallium | 1 |
Transcript
Transcript ID | pfu_aug1.0_6762.1_60098.t1 |
---|---|
Definition | - |
>pfu_aug1.0_6762.1_60098.t1 atgatctcggtgcgaaacgtcttcgctataattcaagactcgaaactagacacgctcgcgatggcggagttaccgattaa ttgttatgtcaacattcctcgacaggagtcagaagccgaagaaaaaaagatgaattttaaactggtcttactgatgtgca taataatgattgtgttgacggacgcatggttttggaggaggagaagacgtagatctagtcgtggtcatatcagaggatcg tttggttgtcccgggggtagatgttctggtactataagtggtcatagaacatggaataatggcagaacctccctgggagg acacattacttgtggaggtgggggatgtggagctggagtcagatttattcacaggttcaaaaaggaggctctgagagacg aaaacaaatttattattaccctaactttgcctgcatgtgattttcacccctatgatctgaacacaagtaaaacaattgag aaaagggagctgaggttctggttcagacaagatgatccagctctggtagactcactgttcaagtctctggacgaagacgg taatggctcagtctccatgacggaatttgccaatatggcgcctaaagtaataaagggttgcgacggccggagtggaggca aagttggtcagcgaggagacaaaggtccaaaatag |
Protein
Protein ID | pfu_aug1.0_6762.1_60098.t1 |
---|---|
Definition | - |
>pfu_aug1.0_6762.1_60098.t1 MISVRNVFAIIQDSKLDTLAMAELPINCYVNIPRQESEAEEKKMNFKLVLLMCIIMIVLTDAWFWRRRRRRSSRGHIRGS FGCPGGRCSGTISGHRTWNNGRTSLGGHITCGGGGCGAGVRFIHRFKKEALRDENKFIITLTLPACDFHPYDLNTSKTIE KRELRFWFRQDDPALVDSLFKSLDEDGNGSVSMTEFANMAPKVIKGCDGRSGGKVGQRGDKGPK |