Gene
Gene Model ID | pfu_aug1.0_7320.1_45633 |
---|---|
Locus | scaffold7320.1 : 12776 ... 18850 : + |
To GenomeBrowser | scaffold7320.1:12776..18850 |
Genes list of scaffold | scaffold7320.1 |
Synonym | pfu_aug2.0_35.1_16747 |
Manual annotation
Study field | Transcription Factors |
---|---|
Gene name | Pfu-ID |
Description | Best hit to NP_002157 DNA-binding protein inhibitor ID-2 [Homo sapiens] with 2e-20 by a BLASTP search against NCBI Homo sapiens nr database. This annotation is based on NJ, ML, and BI. |
mRNA evidence |
Hmmer Search for Pfam
query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
---|---|---|---|---|---|---|---|---|---|---|
pfu_aug1.0_7320.1_45633.t1 | 1 | 1 | HLH | 36 | 74 | 2.0e-09 | 36.9 | 2.5e-13 | 3.6e-09 | 36.1 |
Blast Hit to nr / sp
query | Subject ID | Subject Name | evalue |
---|---|---|---|
pfu_aug1.0_7320.1_45633.t1 | gi|351712276|gb|EHB15195.1| | 2.0e-14 |
Expression profile
(Color code: FPKM>10&<50, blue; FPKM>50, pink)Libraries | EST count |
---|---|
>Embryonic/Larval stages | |
mix | 1 |
egg-4cell | 1 |
8-16cell | 1 |
egg-Dshape | 1 |
trochophore | 1 |
>Adult tissues | |
Dshape | 1 |
mantle | 1 |
mantleEdge | 1 |
mantlePallium | 1 |
Transcript
Transcript ID | pfu_aug1.0_7320.1_45633.t1 |
---|---|
Definition | - |
>pfu_aug1.0_7320.1_45633.t1 atgaaagccgtaacacagaacgtagtgagaccagtagagttcggaatcaagaaggattctccttgtagtaaagtcgtcaa gagtaaaatggatgaaacagcagaagaaatgcaggcttgtttcctgaagttgaaggaactcgtgccctccattccccagg ataggaagctctccaagacacagttattacaacacgtcattgactatatcttagacttggaagttgctctggattttaat cctgaagttcttaccaccgtccctccggcccctgggtcagctaacagatccccactccaggagaaagccgagccaaacaa catagtggacactcagggtcccacccccatggaggaggacagctgtgacaccaagtaa |
Protein
Protein ID | pfu_aug1.0_7320.1_45633.t1 |
---|---|
Definition | - |
>pfu_aug1.0_7320.1_45633.t1 MKAVTQNVVRPVEFGIKKDSPCSKVVKSKMDETAEEMQACFLKLKELVPSIPQDRKLSKTQLLQHVIDYILDLEVALDFN PEVLTTVPPAPGSANRSPLQEKAEPNNIVDTQGPTPMEEDSCDTK |