Gene
Gene Model ID | pfu_aug1.0_7360.1_67678 |
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Locus | scaffold7360.1 : 30826 ... 44844 : + |
To GenomeBrowser | scaffold7360.1:30826..44844 |
Genes list of scaffold | scaffold7360.1 |
Synonym | NA |
Manual annotation
Study field | Biomineralization |
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Gene name | Taurine transporter |
Description | NCBI BLASTP best hit to BAE80716 (AB234293).The 31st to 120th residues exhibit high similarity. |
mRNA evidence |
Hmmer Search for Pfam
query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
---|---|---|---|---|---|---|---|---|---|---|
pfu_aug1.0_7360.1_67678.t1 | 1 | 1 | SNF | 31 | 154 | 2.1e-40 | 138.6 | 1.82169e-44 | 2.69999e-40 | 138.3 |
Blast Hit to nr / sp
query | Subject ID | Subject Name | evalue |
---|---|---|---|
pfu_aug1.0_7360.1_67678.t1 | gi|89255269|dbj|BAE80716.1| | 0.0 |
Expression profile
(Color code: FPKM>10&<50, blue; FPKM>50, pink)Libraries | EST count |
---|---|
>Embryonic/Larval stages | |
mix | 1 |
>Adult tissues | |
adductorMuscle | 1 |
Transcript
Transcript ID | pfu_aug1.0_7360.1_67678.t1 |
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Definition | - |
>pfu_aug1.0_7360.1_67678.t1 atgaatttaggacccctcctggaaaaaaatcctggatccgcccatggaggacgttacttatctaaggaactttcacaact atatttgtgtgctttcctgatcccgtattttatatctgtattgttagggggaatacccaccttctttttggaggtgtccc tcggtcagttcatgtcagagggcggaatagggacctggaaaatcagccctcttttccaaggtatcgggtttgcctgtacg gtcattgtctttctgctgaactgtgaatacaacatcattctgacatgggcattctactatctattttcttctttcacttc aacgttaccatggtcacatggtgcaaatgagtggaactcacctcaatgtcactatgaagcagccaatccgatgaagcaga atgagacaggcaaccaatcagctggcttctcctttacgaactcggcattatccaatcttaccaaagctggatcttcattg gctactattgcagccaatgtgtcaatgaacactagcggaatgacgaccgagaaaccggctgtttgtgatcccgttacaga attttgggactgcagtaaaatagattataattcaaatgctttatctgtaatatggacagtgtccgcaagggaatacgata acctttag |
Protein
Protein ID | pfu_aug1.0_7360.1_67678.t1 |
---|---|
Definition | - |
>pfu_aug1.0_7360.1_67678.t1 MNLGPLLEKNPGSAHGGRYLSKELSQLYLCAFLIPYFISVLLGGIPTFFLEVSLGQFMSEGGIGTWKISPLFQGIGFACT VIVFLLNCEYNIILTWAFYYLFSSFTSTLPWSHGANEWNSPQCHYEAANPMKQNETGNQSAGFSFTNSALSNLTKAGSSL ATIAANVSMNTSGMTTEKPAVCDPVTEFWDCSKIDYNSNALSVIWTVSAREYDNL |