Gene
Gene Model ID | pfu_aug1.0_7478.1_31392 |
---|---|
Locus | scaffold7478.1 : 4376 ... 14664 : + |
To GenomeBrowser | scaffold7478.1:4376..14664 |
Genes list of scaffold | scaffold7478.1 |
Synonym | NA |
Manual annotation
Study field | other developmental genes |
---|---|
Gene name | pitx-likeB |
Description | NCBI BLASTP hit to gb|AAH73479.1| |
mRNA evidence |
Hmmer Search for Pfam
query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
---|---|---|---|---|---|---|---|---|---|---|
pfu_aug1.0_7478.1_31392.t1 | 1 | 1 | Homeobox | 140 | 174 | 1.4e-10 | 40.6 | 6.4e-14 | 2.4e-10 | 39.8 |
Blast Hit to nr / sp
query | Subject ID | Subject Name | evalue |
---|---|---|---|
pfu_aug1.0_7478.1_31392.t1 | gi|148234542|ref|NP_001081756.1| | paired-like homeodomain 2 [Xenopus laevis] | 2.0e-19 |
Transcript
Transcript ID | pfu_aug1.0_7478.1_31392.t1 |
---|---|
Definition | - |
>pfu_aug1.0_7478.1_31392.t1 atgacagcaaaggtcgttctgggttctggaaaatacatcgccatattttaccggaattcactacggggacattatgaaaa cgttatgcagtgcccggacgagtgtatctccgcccccggagagttccgaggacttgagtctatggactcactacaagatc atattacattagaccagtttgttgcaagtgttaattcttcagaagcgaatgtgactatgcatcacttagaaaatgcctcc aatgtcaatggggagtctggtataggactcaccagcccccagggtggggtccgtgtggacggtctgtcccccagctctac cgatacttctatagacaaacccacagattccaacgacgcatcgaagtctaagatggacgacagtgcgtcagatgacgaca aaaagaagaagcgtcaacgacgccaaaggacgcattttaccagccaacagttacaggaattagaagccacctttgcccgc aacagatatcccgatatggcgactagagaggaaatagcggncgtggttgcagcgattatgaagatattcatatga |
Protein
Protein ID | pfu_aug1.0_7478.1_31392.t1 |
---|---|
Definition | - |
>pfu_aug1.0_7478.1_31392.t1 MTAKVVLGSGKYIAIFYRNSLRGHYENVMQCPDECISAPGEFRGLESMDSLQDHITLDQFVASVNSSEANVTMHHLENAS NVNGESGIGLTSPQGGVRVDGLSPSSTDTSIDKPTDSNDASKSKMDDSASDDDKKKKRQRRQRTHFTSQQLQELEATFAR NRYPDMATREEIAXVVAAIMKIFI |