Gene
Gene Model ID | pfu_aug1.0_7813.1_31463 |
---|---|
Locus | scaffold7813.1 : 43646 ... 48609 : + |
To GenomeBrowser | scaffold7813.1:43646..48609 |
Genes list of scaffold | scaffold7813.1 |
Synonym | NA |
Manual annotation
Study field | Environmental Response |
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Gene name | histamine H3 receptor-like |
Description | BLASTP top hit to XP_001368303.1 [Monodelphis domestica] |
mRNA evidence |
Hmmer Search for Pfam
query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
---|---|---|---|---|---|---|---|---|---|---|
pfu_aug1.0_7813.1_31463.t1 | 1 | 1 | 7TM_GPCR_Srsx | 35 | 134 | 6.7e-07 | 28.7 | 1.8e-10 | 9.1e-07 | 28.2 |
pfu_aug1.0_7813.1_31463.t1 | 1 | 1 | 7tm_1 | 40 | 141 | 3.3e-26 | 91.9 | 9.0e-30 | 4.5e-26 | 91.5 |
Blast Hit to nr / sp
query | Subject ID | Subject Name | evalue |
---|---|---|---|
pfu_aug1.0_7813.1_31463.t1 | gi|126302733|ref|XP_001368303.1| | PREDICTED: histamine H3 receptor isoform X1 [Monodelphis domestica] | 2.0e-22 |
Transcript
Transcript ID | pfu_aug1.0_7813.1_31463.t1 |
---|---|
Definition | - |
>pfu_aug1.0_7813.1_31463.t1 atgtcgaacgcctcacaaagtgacgaggaaggagaggagtttgaggaaggctttccgctcaaagtcaccgtaccatgtgg tataattatagccgtcctcattctactagctgtgataggtaatgtgttcactattgcagcgtttgtccgagattccaagc ttcgcacagtatacaacatgtacatagcgaaccttgctatcaccgatttccttttaggatgcatcagtatgccattctac gctgtgtacacactgaagaactattcctggccattcggttatcatttctgtaaggtttacatggtgatagactttaccct ctgcttgaattctgtgctcatcatgatcgtcattagccttgacagatttctacttcttcgacacggtccacactatgaac agcggttgcagaggaaaagtcgaaaatgtgtcagccaaccagagcccttggtggctatatttgttgaccgatcggcacga aaaacacatatcttgcagaggactttgactacttgcttcctggaaggcttggtgaaattcagtgaacggtag |
Protein
Protein ID | pfu_aug1.0_7813.1_31463.t1 |
---|---|
Definition | - |
>pfu_aug1.0_7813.1_31463.t1 MSNASQSDEEGEEFEEGFPLKVTVPCGIIIAVLILLAVIGNVFTIAAFVRDSKLRTVYNMYIANLAITDFLLGCISMPFY AVYTLKNYSWPFGYHFCKVYMVIDFTLCLNSVLIMIVISLDRFLLLRHGPHYEQRLQRKSRKCVSQPEPLVAIFVDRSAR KTHILQRTLTTCFLEGLVKFSER |