Gene
Gene Model ID | pfu_aug1.0_8067.1_60363 |
---|---|
Locus | scaffold8067.1 : 350 ... 5295 : - |
To GenomeBrowser | scaffold8067.1:350..5295 |
Genes list of scaffold | scaffold8067.1 |
Synonym | pfu_aug2.0_1085.1_18080 |
Manual annotation
Study field | Biomineralization |
---|---|
Gene name | tyrosinase-like protein 6 |
Description | NCBI BLASTP best hit to AAZ66340 |
mRNA evidence |
Hmmer Search for Pfam
query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
---|---|---|---|---|---|---|---|---|---|---|
pfu_aug1.0_8067.1_60363.t1 | 1 | 1 | Tyrosinase | 168 | 257 | 1.2e-07 | 32.1 | 3.3e-11 | 2.5e-07 | 31.1 |
Blast Hit to nr / sp
query | Subject ID | Subject Name | evalue |
---|---|---|---|
pfu_aug1.0_8067.1_60363.t1 | gi|72132971|gb|AAZ66340.1| | tyrosinase [Pinctada fucata] | 0.0 |
Expression profile
(Color code: FPKM>10&<50, blue; FPKM>50, pink)Libraries | EST count |
---|---|
>Embryonic/Larval stages | |
mix | 1 |
>Adult tissues | |
mantleEdge | 1 |
mantlePallium | 1 |
Transcript
Transcript ID | pfu_aug1.0_8067.1_60363.t1 |
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Definition | - |
>pfu_aug1.0_8067.1_60363.t1 atgcattcgctaacagcgtgttttgtcacctgcctgatcctttcatctgtcggagcgtttctggacattggagaaaatgt ggaagataattttattcaaagttgcctcggtctttacccatacgacaacaatacaacccagcacacgagagactgtgata aatcgttagaaaatttcttcaacttcacttcgtctcaagtgaacacatttttctctctgcaaagggaaagtcaaggcgac ttgttctcggaaaataagagactgaagagacgtgtgggtttgaggataagaagagaatgtagaactttgtccgagcacga gagaaataggctttttgatgccatagtcattttgaagattggacctgagacagctgattttactcagaaaatgtacaaag aagaacacgcaatcttttgtctgttatttgggaatgggtatggtatggttataaatggtccatttagaaactggagactg gataagccatttaactatcgactaagacgaaatatcggtcaacgtgggtctctgataagggcacgtactgtagacaaaat tgtgtatgatccaagaataaggcaccagacacaaataacggctggaaagaattcggtcggatttcccgatccagataatg ggcgtaagcaaagtctagaggaaattcatttcaatattcacgtgtttcttggagagtttgtaaacagtatcgaggatcca atagaatggtttttccatggttacgttgactacatatgggaattgtttagagtaaaacaaaagaaactaggtattgatcc agccaacgactacccagaaaatggtgacgatgagcacagggcgggaaagcgaatggttccattctttcaattcagaaaca tagacggctatagcaacatgttcactgacaggatatacagatatgctccccacccaacctgtggtaacagatgtggcgga gcatcaaaggaattcttgtattgtccaaaaggaggtcatcgccggactcgatgcctatccaggtcaacaaacagagatca tgtaccaccattagtactgaaagagatcagcaatcctatattagaagttcacgtaaggaaaggtatagtaagccgtgccg tgctcaactccatggctcatgaggtagcacttaaggaaggtcccatcaggtaccccaaaatctacccaatcagctatgat gaccctcgtacatttatcggatag |
Protein
Protein ID | pfu_aug1.0_8067.1_60363.t1 |
---|---|
Definition | - |
>pfu_aug1.0_8067.1_60363.t1 MHSLTACFVTCLILSSVGAFLDIGENVEDNFIQSCLGLYPYDNNTTQHTRDCDKSLENFFNFTSSQVNTFFSLQRESQGD LFSENKRLKRRVGLRIRRECRTLSEHERNRLFDAIVILKIGPETADFTQKMYKEEHAIFCLLFGNGYGMVINGPFRNWRL DKPFNYRLRRNIGQRGSLIRARTVDKIVYDPRIRHQTQITAGKNSVGFPDPDNGRKQSLEEIHFNIHVFLGEFVNSIEDP IEWFFHGYVDYIWELFRVKQKKLGIDPANDYPENGDDEHRAGKRMVPFFQFRNIDGYSNMFTDRIYRYAPHPTCGNRCGG ASKEFLYCPKGGHRRTRCLSRSTNRDHVPPLVLKEISNPILEVHVRKGIVSRAVLNSMAHEVALKEGPIRYPKIYPISYD DPRTFIG |