Gene
Gene Model ID | pfu_aug1.0_8205.1_53128 |
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Locus | scaffold8205.1 : 49289 ... 55895 : - |
To GenomeBrowser | scaffold8205.1:49289..55895 |
Genes list of scaffold | scaffold8205.1 |
Synonym | pfu_aug2.0_361.1_04060 |
Manual annotation
Study field | structural proteins |
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Gene name | calponin |
Description | Calponin partial sequence. BLASTP top hit to AB052656 (Mytilus galloprovincialis). |
mRNA evidence |
Hmmer Search for Pfam
query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
---|---|---|---|---|---|---|---|---|---|---|
pfu_aug1.0_8205.1_53128.t1 | 1 | 1 | CH | 10 | 71 | 1.2e-06 | 28.5 | 9.5e-11 | 1.4e-06 | 28.2 |
Transcript
Transcript ID | pfu_aug1.0_8205.1_53128.t1 |
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Definition | - |
>pfu_aug1.0_8205.1_53128.t1 atgggcgctaaatatgaccctgctgctgaggcggaagtcaggaactggataaaacagctgatcggcgaggacatcggtga cggcgccatgaacgtggagaaaaacctcagagatggagtcattcttatcaaacttttacaaaaactatacgaagggacct ccaacctacccaacaaggccagaaccatgaaactctcatacaacacaatgaatgctcctttcaaacagggctaa |
Protein
Protein ID | pfu_aug1.0_8205.1_53128.t1 |
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Definition | - |
>pfu_aug1.0_8205.1_53128.t1 MGAKYDPAAEAEVRNWIKQLIGEDIGDGAMNVEKNLRDGVILIKLLQKLYEGTSNLPNKARTMKLSYNTMNAPFKQG |