Gene
Gene Model ID | pfu_aug1.0_83486.1_63907 |
---|---|
Locus | scaffold83486.1 : 1 ... 2758 : - |
To GenomeBrowser | scaffold83486.1:1..2758 |
Genes list of scaffold | scaffold83486.1 |
Synonym | NA |
Manual annotation
Study field | Transcription Factors |
---|---|
Gene name | Pfu-HES6 |
Description | Best hit to NP_066993 transcription factor HES-4 isoform 2 [Homo sapiens] with 1e-08 by a BLASTP search against NCBI Homo sapiens nr database. The predicted protein has one Hairy_orange domain and one WRPW motif in its C-terminus. This annotation is based on NJ, ML, and BI. pfu0_2_05010_03461 and pfudmixc37094g13675 were used for analyses. |
mRNA evidence | pfudmixc37094g13675 |
Expression profile
(Color code: FPKM>10&<50, blue; FPKM>50, pink)Libraries | EST count |
---|---|
>Embryonic/Larval stages | |
mix | 1 |
>Adult tissues |
Transcript
Transcript ID | pfu_aug1.0_83486.1_63907.t1 |
---|---|
Definition | - |
>pfu_aug1.0_83486.1_63907.t1 aaaaataaatcaaagttggagaaagcagatattcttgagatggctgtggattttatcaagcggaaccgttacacacctga taaacagacagagcaaaaacaatccaaaaaggagtctgagcagcaactctatgtggcgggatataataaatgttgtcagg aactgaccgaaatgattgacgaaaaccaaaatatcccgggtgaaatgaaactaaaactaactagtcatcttcaaaactgc caagaaaagtcaaagaatggacagagcagcgacgaaggacgagacttgctgcagagggaagttttcaagcaattccaaac aataaaaccgaaaaccgttcctgaaaatacgacaaaggaacaaaacgtggtttcagaaaaagagaaatccagaaatgaag tatctacaacaagtcaaacttcaaatggtgctaatttccttctctgcaatacagcactgcctacatatatactggtgcca gcggctaccgtctgcaaaccgttgcacgtgcttcaacagcaacagacgacacctgtgaccgtcgtcaaccagcagcagac aacaaacaaaacaaatctaggacaatcttctatcaacatgctcgatttgaatgctttaaatttgcagcaaccacagtttg ttcaggtagaaaaaaatccctcgcaattcattccaaattttcttccaaatttgtcaactacccaaccactatttgtgccg tattctacgaactgtcatgtcccctctgttttaagttcaacatcagcacaaaggagtgttgtcccttcaaatccaacagc aagtttatcaaactgtcagcctttcttttctatacaactgcctaccccacaaacaggatccgaaaactcaagtatccaac aaagtctgcccagaccgtcttctcagtcctctgatactatgtggcgaccttggtga |
Protein
Protein ID | pfu_aug1.0_83486.1_63907.t1 |
---|---|
Definition | - |
>pfu_aug1.0_83486.1_63907.t1 KNKSKLEKADILEMAVDFIKRNRYTPDKQTEQKQSKKESEQQLYVAGYNKCCQELTEMIDENQNIPGEMKLKLTSHLQNC QEKSKNGQSSDEGRDLLQREVFKQFQTIKPKTVPENTTKEQNVVSEKEKSRNEVSTTSQTSNGANFLLCNTALPTYILVP AATVCKPLHVLQQQQTTPVTVVNQQQTTNKTNLGQSSINMLDLNALNLQQPQFVQVEKNPSQFIPNFLPNLSTTQPLFVP YSTNCHVPSVLSSTSAQRSVVPSNPTASLSNCQPFFSIQLPTPQTGSENSSIQQSLPRPSSQSSDTMWRPW |