Gene
Gene Model ID | pfu_aug1.0_8887.1_02664 |
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Locus | scaffold8887.1 : 20659 ... 53975 : - |
To GenomeBrowser | scaffold8887.1:20659..53975 |
Genes list of scaffold | scaffold8887.1 |
Synonym | pfu_aug2.0_12.1_06719 |
Manual annotation
Study field | Reproduction |
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Gene name | C1q domain containing protein |
Description | Best hit to MgC1q83. 87 bits, 8e-15 |
mRNA evidence |
Hmmer Search for Pfam
query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
---|---|---|---|---|---|---|---|---|---|---|
pfu_aug1.0_8887.1_02664.t1 | 1 | 1 | C1q | 283 | 409 | 4.3e-21 | 75.2 | 9.3e-25 | 6.9e-21 | 74.5 |
Transcript
Transcript ID | pfu_aug1.0_8887.1_02664.t1 |
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Definition | - |
>pfu_aug1.0_8887.1_02664.t1 atgtacgagcccgacactcccattttgaagttgtctaaaaggttgaaaggattcatcaatctgaagaccaaagacctcaa agccattgctttcaaactagaacaagttttgtatggaatattgtcatttgaatgtcttctttccgtgttcattgcgttct ttcttttcatcattaaagaacagataaatttgcagcatggaccagacatgcacgttttggatactaaaccctcgtcagtg atccttaatccaaacaatctaatatggccaaagagtgtgaaagttatgtccaaaaatgtaccgaaagacgtagcagggat cctgagcaacagctgtggagcgagatacttagttcttgttgattattatggacgaggcacaaatgagttaaagacgatcc tgacgataatctcaacaacactcacaattgagcaccacattgagcatcgacggacccctagcaagagcaagctagagatg ggaccagaacaattggaagaaaaacatgacacagaaattgcgaacctcaagaaatcccttcaagaagagagaatctttaa cagaaagcttgccgatagatgcacacgcttagaagaagaaatcaaaagtgccagatatggagaaaccgacctagacaaaa tagaagcaatacataaaggccacgttacggtttggctaaaacatcgtatctacatgaggccaggggaacaaatatctcct ccatacgggttcatagctctttccgtatcagtttcatcttccttgcacacgaaaatgttagaggaacttcgaaagcgact tctgcttaacgacaaaacgacttctgtatcacaggcaacaaaagtggcgttctacgtaagacttatgacgaataatattg cagttggggagcgcgaaacagtcaaattcaacacagtaataaccaacattggaaatggatatgacgtaaataacggaatc tttttttgtccaatcagtggcatttatttattcgccgcatcaattgcatcacaaaacgggtccgataagaatcttgatgc agagatcgtgcaccaagggagcgcagtcgctcatctacacgcaaccattcatggaattgacatgtcgtcacaagttgtag ttctacattgtctacaaggagagaaagtgtggatacgacatgtcgaaggggcgggagactcaaagacctttacaggcgat tacagcggattcacgggagtattaatttcctcgcattaa |
Protein
Protein ID | pfu_aug1.0_8887.1_02664.t1 |
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Definition | - |
>pfu_aug1.0_8887.1_02664.t1 MYEPDTPILKLSKRLKGFINLKTKDLKAIAFKLEQVLYGILSFECLLSVFIAFFLFIIKEQINLQHGPDMHVLDTKPSSV ILNPNNLIWPKSVKVMSKNVPKDVAGILSNSCGARYLVLVDYYGRGTNELKTILTIISTTLTIEHHIEHRRTPSKSKLEM GPEQLEEKHDTEIANLKKSLQEERIFNRKLADRCTRLEEEIKSARYGETDLDKIEAIHKGHVTVWLKHRIYMRPGEQISP PYGFIALSVSVSSSLHTKMLEELRKRLLLNDKTTSVSQATKVAFYVRLMTNNIAVGERETVKFNTVITNIGNGYDVNNGI FFCPISGIYLFAASIASQNGSDKNLDAEIVHQGSAVAHLHATIHGIDMSSQVVVLHCLQGEKVWIRHVEGAGDSKTFTGD YSGFTGVLISSH |