Gene
Gene Model ID | pfu_aug2.0_35.1_16758 |
---|---|
Locus | scaffold35.1 : 327991 ... 335543 : - |
To GenomeBrowser | scaffold35.1:327991..335543 |
Genes list of scaffold | scaffold35.1 |
Synonym | pfu_aug1.0_3120.1_51892 |
Manual annotation
Annotation by Blast2GO
Annotation | GO |
---|---|
cytoplasmic 2 | GO:0005524 GO:0005737 GO:0005856 |
Hmmer Search for Pfam
query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
---|---|---|---|---|---|---|---|---|---|---|
pfu_aug2.0_35.1_16758.t1 | 1 | 1 | Actin | 7 | 332 | 0.0 | 476.9 | 0.0 | 0.0 | 476.6 |
Blast Hit to nr / sp
query | Subject ID | Subject Name | evalue |
---|---|---|---|
pfu_aug2.0_35.1_16758.t1 | gi|676421273|ref|XP_009043798.1| | hypothetical protein LOTGIDRAFT_227913 [Lottia gigantea] | 0.0 |
pfu_aug2.0_35.1_16758.t1 | gi|676492678|ref|XP_009065998.1| | hypothetical protein LOTGIDRAFT_205506 [Lottia gigantea] | 0.0 |
pfu_aug2.0_35.1_16758.t1 | gi|241157545|ref|XP_002408110.1| | actin, putative [Ixodes scapularis] | 0.0 |
pfu_aug2.0_35.1_16758.t1 | gi|156395354|ref|XP_001637076.1| | predicted protein [Nematostella vectensis] | 0.0 |
pfu_aug2.0_35.1_16758.t1 | gi|700396038|ref|XP_009938638.1| | PREDICTED: actin, cytoplasmic 2-like [Opisthocomus hoazin] | 0.0 |
Transcript
Transcript ID | pfu_aug2.0_35.1_16758.t1 |
---|---|
Definition | - |
>pfu_aug2.0_35.1_16758.t1 atggttggtatgggacagaaggacagctatgtaggagacgaggcccaaagtaagagaggtatcctcaccctcaaataccc cattgagcacggaattgtcacaaactgggacgatatggagaagatctggcatcataccttctacaatgaactccgtgtgg cccccgaagaacaccctgttctcctgactgaagctcctctcaacccaaaggccaacagagaaaagatgacacagatcatg tttgaaaccttcaactctcctgccatgtacgtagctatccaggccgtattgtcactgtacgcttccggtcgtactacagg tatcgtactggactctggggatggggtatcacatacagtacctatctacgagggatacgcccttccccacgccatcatga ggttagatcttgccggacgtgacctcacagattaccttatgaagatcctcacagagcgtgggtactcgttcaccaccaca gctgagagagaaatcgtcagagacattaaagaaaaactatgttatgttgcattggactttgatcaagaaatgcaaacagc ttcatcgtcatcatctctagagaagagctatgaacttcctgacggtcaggtcatcaccattggtaacgaaaggttcagat gtcccgaggccatgttccagccatctttcctcggtatggaatcaacaggaattcacgagaccacgtacaacagtatcatg aaatgtgacgtagacattcgtaaagacttgtacgcaaataccgttttatctggtggttctaccatgtacccaggtatcgc tgaccgtatgcagaaagaaatatccgctcttgctccatcaacgatgaaaattaagatcatagctccaccagagaggaaat actccgtgtggataggtggatctatccttgcttctctctccaccttccagcagatgtggatcagcaaacaggaatacgac gagtctggtccatcaatcgtccacaggaagtgcttctaa |
Protein
Protein ID | pfu_aug2.0_35.1_16758.t1 |
---|---|
Definition | - |
>pfu_aug2.0_35.1_16758.t1 MVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIM FETFNSPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAIMRLDLAGRDLTDYLMKILTERGYSFTTT AEREIVRDIKEKLCYVALDFDQEMQTASSSSSLEKSYELPDGQVITIGNERFRCPEAMFQPSFLGMESTGIHETTYNSIM KCDVDIRKDLYANTVLSGGSTMYPGIADRMQKEISALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYD ESGPSIVHRKCF |