Gene
| Gene Model ID | aacu_s0062.g1 |
|---|---|
| Locus | sc0000062 : 2866 ... 20580 : + |
| To GenomeBrowser | sc0000062:2866..20580 |
| Genes list of scaffold | sc0000062 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| aacu_s0062.g1.t1 | 1 | 1 | Roc | 218 | 264 | 7.4e-08 | 32.5 | 7.0e-11 | 2.9e-07 | 30.6 |
| aacu_s0062.g1.t1 | 1 | 1 | COR | 407 | 602 | 6.9e-20 | 71.6 | 6.2e-23 | 2.5e-19 | 69.7 |
Results of InterPro Scan
| Gene Model ID | Analysis | Start | End | i_acc | i_desc | GO | Pathway |
|---|---|---|---|---|---|---|---|
| aacu_s0062.g1.t1 | ProSiteProfiles | 75 | 171 | IPR001584 | Integrase, catalytic core | GO:0015074 | |
| aacu_s0062.g1.t1 | Gene3D | 99 | 173 | IPR036397 | Ribonuclease H superfamily | GO:0003676 | |
| aacu_s0062.g1.t1 | SUPERFAMILY | 104 | 173 | IPR012337 | Ribonuclease H-like superfa... | ||
| aacu_s0062.g1.t1 | Gene3D | 188 | 415 | ||||
| aacu_s0062.g1.t1 | PANTHER | 217 | 263 | ||||
| aacu_s0062.g1.t1 | Pfam | 218 | 264 | ||||
| aacu_s0062.g1.t1 | SUPERFAMILY | 218 | 285 | IPR027417 | P-loop containing nucleosid... | ||
| aacu_s0062.g1.t1 | PANTHER | 327 | 339 | ||||
| aacu_s0062.g1.t1 | SUPERFAMILY | 328 | 351 | IPR027417 | P-loop containing nucleosid... | ||
| aacu_s0062.g1.t1 | PANTHER | 383 | 602 | ||||
| aacu_s0062.g1.t1 | Pfam | 407 | 602 | IPR032171 | C-terminal of Roc (COR) domain | KEGG: 04150+2.7.11.1|KEGG: 04151+2.7.11.1|KEGG: 04926+2.7.11.1|KEGG: 05165+2.7.11.1 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| aacu_s0062.g1.t1 | sp|Q55E58|PATS1_DICDI | Probable serine/threonine-protein kinase pats1 | 8.0e-18 |
| aacu_s0062.g1.t1 | sp|Q54WS5|ROCO6_DICDI | Probable serine/threonine-protein kinase roco6 | 3.0e-11 |
| aacu_s0062.g1.t1 | sp|Q6XHB2|ROCO4_DICDI | Probable serine/threonine-protein kinase roco4 | 7.0e-11 |
Transcript
| Transcript ID | aacu_s0062.g1.t1 |
|---|---|
| Definition | - |
>aacu_s0062.g1.t1 gtgatcttgtttttgtcttgaaccatcataattattgattaaagtgtaaaagagatatttgcattatatcaagtctgaat cattgcacgagacacaacagatcttcagctttaaaaagaaaagattttgaaccaccgccacaatgcggatcagaaagata gatgcttttgatgaaactagtgacgactggaatgcctctgtagaaaaagtggaacaattcttcattgccaatgaaattag aaatgaagaacgagtggcagttgtacttagtctcatgggagacaaagctactgccaaatctgtgtgtcccagaaagccat ccagcctttctttcaaggatattttggaaaccttccagcaacatctattacctaaaccgttactcatcgcagagcaattt ctttccacagaagaagccaacttgaaggtgaaactgttagtgcttacaatgtttgtaattgtcatggatgcgcactttaa atggcctgaggtttttccagtggccttgacaaacaccaccagaaccattgaggaactgagatcaaagcttttcaccgcac atggtttaccaaaacaacttgtcagtgacaatgaaccgcaactcatagccaatgaatttcgagcattcctgaggagtaat ggtatcaagcacataagagtttggaggggcttgttacgcttctctagatgtaaaagcgtaatcgttggaaagcagtcatt tagtatccactgtggatacacgagccagaataggacgtggagtgactgcttcaattacaaatctcgcccacagcagacaa tagatatggaaaatgaaaatgacatctattttgttttgtgggattttgctggcgaatcagtttattatgagactcataca ctctttctgacttcaagtgcaatcttccttttggtttatgacctaagccgagatcctaatgaaaatgcaccgcccgtgaa aaaacaagaaatgttcggagtttttgaggacaggattggaataaaaagtaaccttgactatctagagtactggatgactt cagtttcttcagtatccagtcaagttgaagatcagaaagtgcactcagcttcagcatcaacagttctccctaacaccctt ccacctgttttcctagtttgtacgcatgctgatcagccctcctgcgaaaaagatccaaaagatctggcccttaaagtgta tggcgaattgctgaaaaagccttactacacatacctgtgtggtaagtttgaagttgacaatactaaatcaggccagaaac cggagtgtctaggagtgtcacgcttacgagagaacattcgagaagttgccaaggagctaccacaaatgaaggaatttatt cctatcaagtggttggagtttgagaaaatgctctctctgaaaaattttcataaatggattactattgagcaagcaaagca gatcgcaggttcctgccaaatccacgacaatcaagaatttaaaactgcgcttcaatttttgcattatcagagatttttga tgtattttgataagatcgatgaattgaagaaaattgtctttttggaactccagtggttaatcgatgttatgaaaaaagta attactattaaacgttatgatgatggagaaagagaattcatggactcgtggcgcaagctagagcaagaaggaatcctaga ggagaaactcccgcagcatgtttgggaccggttgattggaaagggtaacacttttaaaagccttatttcaattatggaga aattcagcttgctatgctcttggcctgcatcagatgatttttctagtaatatgtatttggtgccgtccatgttaaggtca catccaccacaggatatcacccagttgattgcctctgcacgactaccttctctttttatcaagtttgaacctgggcaagt tccattgcgcttgttcccgcggcttgtgactcagtttcttatttggggcaaggatagatttttgaactcagtgaaccctc agttgtttcagaattttgccagattgtacaccgctaaggatgacaagtgctctgttgttctcttgtgtcattcctccttt attgaaattgttgttcatgggggcgatcattctttcgaggtgtcttgtgcccaatcagttttcaagcagctccttttgat gcttgagtgtatgcccgaagagttcttttggttggagagtatgagatatcaagctgggatgccttgtacggtttgttgct gtggaagaaaattcaagttttgccaccgtcatgagaaaaatgattgtgagcgagaggaatgtcttcatttcatgccagaa tctgagttgtgcagagccaatgagtacattacctgcaccaggtcaccaaccgcagtggataacaaagtttgcagcaagga tttttcagcatggcttggttctgatcaaaagacaacacccgatgcggttggcgagagacttgtcgcggtatcctcaggga aagtcgccgctgcggtcattgaagctttgtcaaggacagcaaattgagtgaattgttagacaaaaatgcttctattcgaa gtaaactgccgactgcatcttgctggagataacagaggaaaatttgaagcaaacctgctttatgtcgaaagcgaaagcga cttcggtgccacagctgggaaatcattcacagtattcttcgcacgttggggcgttgaatttgatcgatgagtcaaaacct ctgcccgttgaggcaaataattcaaccatcgagttacacttggccgttgaggcgaaagaagagctttcagagtacattga gtcgaaatctctgcccgttgaggtaaaagaaaactttgaagtcgtaaattcaaaatgtggatcgctcgttgaagctaacc attcatttccaaactcgtgcttcgagacaaattctgagtcgatttcacccgtggagagcatccattcgacccttcagtcg aattctttttcgacctttcaatccaaagaaaacttctcaagcacaacattaaattttcgtttgctcaacaatgttgaaca atccttaaaatgtttcggacctaccgaaaggcggttcgcaggttatgaagaacaacttgattgtgatatttacagcataa actatgaaaagcgcctacaagggttaatcaatgcgaatggcacactaaatccttgcctgtccttatgttctgcattgatg aatactttcacgacttacaagcaggcaattgtcatttttagtaatattactttgactattttaacttttacctgaacatt tttcatcagcaagtgataaaactgtttgaagcaactgccaggaacctgcatactggcctttcaaaggaagacttagaaga tatactggcagaaattgatgacttaaaggtcacctacaactgcgtagatggaaaactacttcatgtcaattaaaatactt aattaatt |
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Protein
| Protein ID | aacu_s0062.g1.t1 |
|---|---|
| Definition | - |
>aacu_s0062.g1.t1 MRIRKIDAFDETSDDWNASVEKVEQFFIANEIRNEERVAVVLSLMGDKATAKSVCPRKPSSLSFKDILETFQQHLLPKPL LIAEQFLSTEEANLKVKLLVLTMFVIVMDAHFKWPEVFPVALTNTTRTIEELRSKLFTAHGLPKQLVSDNEPQLIANEFR AFLRSNGIKHIRVWRGLLRFSRCKSVIVGKQSFSIHCGYTSQNRTWSDCFNYKSRPQQTIDMENENDIYFVLWDFAGESV YYETHTLFLTSSAIFLLVYDLSRDPNENAPPVKKQEMFGVFEDRIGIKSNLDYLEYWMTSVSSVSSQVEDQKVHSASAST VLPNTLPPVFLVCTHADQPSCEKDPKDLALKVYGELLKKPYYTYLCGKFEVDNTKSGQKPECLGVSRLRENIREVAKELP QMKEFIPIKWLEFEKMLSLKNFHKWITIEQAKQIAGSCQIHDNQEFKTALQFLHYQRFLMYFDKIDELKKIVFLELQWLI DVMKKVITIKRYDDGEREFMDSWRKLEQEGILEEKLPQHVWDRLIGKGNTFKSLISIMEKFSLLCSWPASDDFSSNMYLV PSMLRSHPPQDITQLIASARLPSLFIKFEPGQVPLRLFPRLVTQFLIWGKDRFLNSVNPQLFQNFARLYTAKDDKCSVVL LCHSSFIEIVVHGGDHSFEVSCAQSVFKQLLLMLECMPEEFFWLESMRYQAGMPCTVCCCGRKFKFCHRHEKNDCEREEC LHFMPESELCRANEYITCTRSPTAVDNKVCSKDFSAWLGSDQKTTPDAVGERLVAVSSGKVAAAVIEALSRTAN |
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