Gene
| Gene Model ID | aacu_s0062.g10 |
|---|---|
| Locus | sc0000062 : 320036 ... 322857 : + |
| To GenomeBrowser | sc0000062:320036..322857 |
| Genes list of scaffold | sc0000062 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| aacu_s0062.g10.t1 | 1 | 1 | zf-RING_2 | 16 | 65 | 6.3e-06 | 26.2 | 7.4e-09 | 6.3e-06 | 26.2 |
| aacu_s0062.g10.t1 | 1 | 1 | zf-RING_UBOX | 17 | 62 | 3.7e-09 | 36.3 | 4.3e-12 | 3.7e-09 | 36.3 |
| aacu_s0062.g10.t1 | 1 | 1 | zf-C3HC4_4 | 17 | 64 | 3.9e-08 | 33.2 | 4.6e-11 | 3.9e-08 | 33.2 |
| aacu_s0062.g10.t1 | 1 | 1 | zf-C3HC4 | 17 | 64 | 3.9e-07 | 29.7 | 4.6e-10 | 3.9e-07 | 29.7 |
| aacu_s0062.g10.t1 | 2 | 1 | zf-B_box | 101 | 144 | 1.1e-11 | 44.5 | 9.6e-07 | 0.00082 | 19.3 |
| aacu_s0062.g10.t1 | 2 | 2 | zf-B_box | 163 | 201 | 1.1e-11 | 44.5 | 3.5e-13 | 3.0e-10 | 39.9 |
| aacu_s0062.g10.t1 | 1 | 1 | Filamin | 376 | 472 | 1.6e-16 | 60.9 | 5.9e-19 | 5.0e-16 | 59.3 |
| aacu_s0062.g10.t1 | 4 | 1 | NHL | 555 | 582 | 9.6e-35 | 116.8 | 1.1e-10 | 9.3e-08 | 31.6 |
| aacu_s0062.g10.t1 | 2 | 1 | DUF5128 | 568 | 636 | 1.0e-13 | 51.0 | 5.3e-08 | 4.6e-05 | 22.6 |
| aacu_s0062.g10.t1 | 1 | 1 | SGL | 570 | 637 | 9.6e-09 | 35.1 | 6.4e-06 | 0.0055 | 16.2 |
| aacu_s0062.g10.t1 | 4 | 2 | NHL | 602 | 629 | 9.6e-35 | 116.8 | 3.7e-12 | 3.2e-09 | 36.2 |
| aacu_s0062.g10.t1 | 4 | 3 | NHL | 649 | 676 | 9.6e-35 | 116.8 | 5.2e-09 | 4.5e-06 | 26.3 |
| aacu_s0062.g10.t1 | 2 | 2 | DUF5128 | 701 | 771 | 1.0e-13 | 51.0 | 5.2e-06 | 0.0044 | 16.1 |
| aacu_s0062.g10.t1 | 4 | 4 | NHL | 785 | 812 | 9.6e-35 | 116.8 | 2.2e-07 | 0.00019 | 21.2 |
Results of InterPro Scan
| Gene Model ID | Analysis | Start | End | i_acc | i_desc | GO | Pathway |
|---|---|---|---|---|---|---|---|
| aacu_s0062.g10.t1 | Gene3D | 2 | 212 | IPR013083 | Zinc finger, RING/FYVE/PHD-... | ||
| aacu_s0062.g10.t1 | PANTHER | 9 | 157 | ||||
| aacu_s0062.g10.t1 | PANTHER | 9 | 157 | ||||
| aacu_s0062.g10.t1 | SUPERFAMILY | 11 | 69 | ||||
| aacu_s0062.g10.t1 | ProSiteProfiles | 17 | 65 | IPR001841 | Zinc finger, RING-type | ||
| aacu_s0062.g10.t1 | SMART | 17 | 64 | IPR001841 | Zinc finger, RING-type | ||
| aacu_s0062.g10.t1 | Pfam | 17 | 62 | IPR027370 | RING-type zinc-finger, LisH... | ||
| aacu_s0062.g10.t1 | ProSitePatterns | 32 | 41 | IPR017907 | Zinc finger, RING-type, con... | ||
| aacu_s0062.g10.t1 | SMART | 99 | 146 | IPR000315 | B-box-type zinc finger | GO:0005622|GO:0008270 | |
| aacu_s0062.g10.t1 | ProSiteProfiles | 99 | 146 | IPR000315 | B-box-type zinc finger | GO:0005622|GO:0008270 | |
| aacu_s0062.g10.t1 | ProSiteProfiles | 159 | 202 | IPR000315 | B-box-type zinc finger | GO:0005622|GO:0008270 | |
| aacu_s0062.g10.t1 | SMART | 159 | 202 | IPR000315 | B-box-type zinc finger | GO:0005622|GO:0008270 | |
| aacu_s0062.g10.t1 | PANTHER | 163 | 813 | ||||
| aacu_s0062.g10.t1 | Pfam | 163 | 201 | IPR000315 | B-box-type zinc finger | GO:0005622|GO:0008270 | |
| aacu_s0062.g10.t1 | PANTHER | 163 | 813 | ||||
| aacu_s0062.g10.t1 | CDD | 164 | 202 | IPR000315 | B-box-type zinc finger | GO:0005622|GO:0008270 | |
| aacu_s0062.g10.t1 | SUPERFAMILY | 168 | 219 | ||||
| aacu_s0062.g10.t1 | Coils | 271 | 302 | ||||
| aacu_s0062.g10.t1 | ProSiteProfiles | 373 | 476 | IPR017868 | Filamin/ABP280 repeat-like | ||
| aacu_s0062.g10.t1 | Gene3D | 374 | 477 | IPR013783 | Immunoglobulin-like fold | ||
| aacu_s0062.g10.t1 | SUPERFAMILY | 376 | 478 | IPR014756 | Immunoglobulin E-set | ||
| aacu_s0062.g10.t1 | Pfam | 376 | 472 | IPR017868 | Filamin/ABP280 repeat-like | ||
| aacu_s0062.g10.t1 | SMART | 377 | 479 | IPR001298 | Filamin/ABP280 repeat | GO:0005515 | |
| aacu_s0062.g10.t1 | MobiDBLite | 485 | 511 | ||||
| aacu_s0062.g10.t1 | Gene3D | 534 | 723 | IPR011042 | Six-bladed beta-propeller, ... | ||
| aacu_s0062.g10.t1 | ProSiteProfiles | 544 | 585 | IPR013017 | NHL repeat, subgroup | ||
| aacu_s0062.g10.t1 | SUPERFAMILY | 552 | 812 | ||||
| aacu_s0062.g10.t1 | Pfam | 555 | 582 | IPR001258 | NHL repeat | GO:0005515 | |
| aacu_s0062.g10.t1 | ProSiteProfiles | 589 | 632 | IPR013017 | NHL repeat, subgroup | ||
| aacu_s0062.g10.t1 | Pfam | 602 | 629 | IPR001258 | NHL repeat | GO:0005515 | |
| aacu_s0062.g10.t1 | ProSiteProfiles | 639 | 679 | IPR013017 | NHL repeat, subgroup | ||
| aacu_s0062.g10.t1 | Pfam | 649 | 676 | IPR001258 | NHL repeat | GO:0005515 | |
| aacu_s0062.g10.t1 | ProSiteProfiles | 713 | 721 | IPR013017 | NHL repeat, subgroup | ||
| aacu_s0062.g10.t1 | Gene3D | 724 | 813 | IPR011042 | Six-bladed beta-propeller, ... | ||
| aacu_s0062.g10.t1 | ProSiteProfiles | 727 | 768 | IPR013017 | NHL repeat, subgroup | ||
| aacu_s0062.g10.t1 | ProSiteProfiles | 772 | 813 | IPR013017 | NHL repeat, subgroup | ||
| aacu_s0062.g10.t1 | Pfam | 785 | 812 | IPR001258 | NHL repeat | GO:0005515 |
Transcript
| Transcript ID | aacu_s0062.g10.t1 |
|---|---|
| Definition | - |
>aacu_s0062.g10.t1 cagacttccttcctttcacaaacataaatagctccttctagagtggaaaaggtcaaaatatttcaatcccttgcatggaa caaaaacatctttctggttttagttaacagtgatgccattgcctttgcctggcctgtccttctcttacaggaacttgctg tgacataaaaatagaaataatatcattcaaaacaaaccaacaacagcaacgtcagttgatcagctagagatgagcaagct gtttacgtcattttcatgactttaaatgacatgttcatttgttgaagcagggggcggagttaaatttggaaatacatttc aatgtcctctacagtaggctgagatagtgaagatatggccgatgtccaagcacgacttgataacatcgaggaagaagtga cttgtcctgtctgtacagaaatttttacggatcccagaaatctaccctgtctacacagtttctgtttggggtgtttgaag ctatggtacaagaaaaatcaagggactgaaaaccctcgttacgacacaattacatgtccaacgtgtagaggagtaagcaa tgttccggaaagcggtgatttgaacgatcttcccatcagcttttaccttcacggcttgattgatgtgttggccgtaaaag aaagcagtaacactcaagtgacatgtggaaattgtggcgagaaaagtttagactcttcttattgcttcgagtgttctatc ttttactgcaaagagtgcgtaaatgctcacaacagaatgcgagacaccaaaaatcatcgaacgctggcactaacagattt tcaagaaaaggactttgacgatctattaaagcggcccgcattttgcccgaaacagcgacatcaaaaagaagaattgaaat attactgcaaaaactgcagagcggcagtctgccaagtgtgtagcactctggagcattctggtcatactttggaacttata gaagacgaagcaagcaggcaaaaagaacaaataccagttttagtagacaaacagaaacagaacttacaggcagagaaagt cagtctcaataaagtgttgaacgacggcgcgaaagtggttcagcaaagggaagatttgaaagcaaacattcaacgtcatg caagagatatgattgcggttattgataggaagacgaagaatttgatcgatgaggcggaaaatcaagcaaaagaaaccttg aaaagtcttaaacatgaaaagatgaaaattgagagtcgcatgaagttgattgaagaaacgctggaaaaatccgatcaact tcttaccagaggtacgtttgcagagatcatccagctaaaaaaatccttgcaattgatcactgacgaaaccgaaaaagtag agccttttgaaactaatcctgagaaaggtcttccaatgttggttttagtaaaaaatgaacatttgcaggaattaatcaat gaggaagaggtaggtcatttagtgccgcttgcacagcaaacaaaagcacagcaatgtgtcgttaacggcaatggactgaa cgatttacttcctggatgtgaagtacatttcacattaaaaacaagaaatagagaaggattgcagtgttacaacgaacatg accaagttgcagtgatgatccaaactgaaggaggacattcatgtgacacagttgttcaagttaacaacaacaaaaatgga gagtatgatctcagcttttgtctaaaatgtcacggcagatatttggttctgatcacagtaaatggggaagaggtccaggg aagtccttttcctttgcaggtgaggcctgtgactctgacggtgaagcatcgtccgcagagacacagcgtcacagatcttc catcgcacaacgaaactggacacttctcaaaccggagtccatctgtccattctttaccagcgcaactgcatccccattta ctagagaatggagcttcggctcaacttgctttcgcgcaaccatttaaagccaaacccattttatcatttggaaagaaagg ctctcgtgatggacagtttcgacacccctggggagtggcagtgagtcgcatccaagagattgctgttactgattcagaaa accaccgtgtgcaaatctttgattttagtgggaaccacttgagatcatttggtcgccaaggtgataaccagggagaattt tgtatccctcttggaatatgctttgataaaaaggacaacattttcgtcgcagacagtggcaaccatcgagtccaaatatt ttctgccgagggtcggtacctaggaatgtttggctggaaaggaagccgtgataatcacctctcaaatcccactgggttgt cgttagattccgatggaaatatcattgtggtcgattcgggaaacaaactagtcaaggtcttttccactggtggcaagctt ctaaggaagattggtggggctggggtgttcaatagtcccatccactgtattgagtgtaatgactgcctcttcgtctcatg ccacgaagaacactgcatcaaagtattcagtacctggggtgactttaggtatcaatttggaaagcagggaacaggtgatg gtgagttgaaggttccttactgtttggctgtttcacactcaaaggagctgatggtttgtgactggcaaaacaatagaata caattgtttgaattggatggtacattcgctggcaagtttggagcaaaaggaaaacgacttggagagtttgatcatccaat gtctgtcgctgttctaagaagtagcagagttgtagtatgtgattcccgtaatcatcaaatccaaatatttgagtagccca tgaaaaaaaaaaaaaaaaaaaa |
|
Protein
| Protein ID | aacu_s0062.g10.t1 |
|---|---|
| Definition | - |
>aacu_s0062.g10.t1 MADVQARLDNIEEEVTCPVCTEIFTDPRNLPCLHSFCLGCLKLWYKKNQGTENPRYDTITCPTCRGVSNVPESGDLNDLP ISFYLHGLIDVLAVKESSNTQVTCGNCGEKSLDSSYCFECSIFYCKECVNAHNRMRDTKNHRTLALTDFQEKDFDDLLKR PAFCPKQRHQKEELKYYCKNCRAAVCQVCSTLEHSGHTLELIEDEASRQKEQIPVLVDKQKQNLQAEKVSLNKVLNDGAK VVQQREDLKANIQRHARDMIAVIDRKTKNLIDEAENQAKETLKSLKHEKMKIESRMKLIEETLEKSDQLLTRGTFAEIIQ LKKSLQLITDETEKVEPFETNPEKGLPMLVLVKNEHLQELINEEEVGHLVPLAQQTKAQQCVVNGNGLNDLLPGCEVHFT LKTRNREGLQCYNEHDQVAVMIQTEGGHSCDTVVQVNNNKNGEYDLSFCLKCHGRYLVLITVNGEEVQGSPFPLQVRPVT LTVKHRPQRHSVTDLPSHNETGHFSNRSPSVHSLPAQLHPHLLENGASAQLAFAQPFKAKPILSFGKKGSRDGQFRHPWG VAVSRIQEIAVTDSENHRVQIFDFSGNHLRSFGRQGDNQGEFCIPLGICFDKKDNIFVADSGNHRVQIFSAEGRYLGMFG WKGSRDNHLSNPTGLSLDSDGNIIVVDSGNKLVKVFSTGGKLLRKIGGAGVFNSPIHCIECNDCLFVSCHEEHCIKVFST WGDFRYQFGKQGTGDGELKVPYCLAVSHSKELMVCDWQNNRIQLFELDGTFAGKFGAKGKRLGEFDHPMSVAVLRSSRVV VCDSRNHQIQIFE |
|