Gene
| Gene Model ID | aacu_s0062.g17 |
|---|---|
| Locus | sc0000062 : 475184 ... 482155 : - |
| To GenomeBrowser | sc0000062:475184..482155 |
| Genes list of scaffold | sc0000062 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| aacu_s0062.g17.t1 | 1 | 1 | RVT_1 | 160 | 276 | 7.9e-08 | 31.9 | 3.8e-11 | 1.5e-07 | 31.0 |
Results of InterPro Scan
| Gene Model ID | Analysis | Start | End | i_acc | i_desc | GO | Pathway |
|---|---|---|---|---|---|---|---|
| aacu_s0062.g17.t1 | MobiDBLite | 1 | 46 | ||||
| aacu_s0062.g17.t1 | Gene3D | 13 | 60 | IPR036875 | Zinc finger, CCHC-type supe... | GO:0003676|GO:0008270 | |
| aacu_s0062.g17.t1 | SUPERFAMILY | 44 | 90 | IPR036875 | Zinc finger, CCHC-type supe... | GO:0003676|GO:0008270 | |
| aacu_s0062.g17.t1 | SMART | 51 | 69 | IPR001878 | Zinc finger, CCHC-type | GO:0003676|GO:0008270 | |
| aacu_s0062.g17.t1 | Gene3D | 61 | 82 | IPR036875 | Zinc finger, CCHC-type supe... | GO:0003676|GO:0008270 | |
| aacu_s0062.g17.t1 | SMART | 73 | 89 | IPR001878 | Zinc finger, CCHC-type | GO:0003676|GO:0008270 | |
| aacu_s0062.g17.t1 | ProSiteProfiles | 74 | 89 | IPR001878 | Zinc finger, CCHC-type | GO:0003676|GO:0008270 | |
| aacu_s0062.g17.t1 | Gene3D | 83 | 112 | IPR036875 | Zinc finger, CCHC-type supe... | GO:0003676|GO:0008270 | |
| aacu_s0062.g17.t1 | PANTHER | 110 | 286 | ||||
| aacu_s0062.g17.t1 | SUPERFAMILY | 110 | 389 | ||||
| aacu_s0062.g17.t1 | Gene3D | 113 | 254 | ||||
| aacu_s0062.g17.t1 | CDD | 142 | 290 | ||||
| aacu_s0062.g17.t1 | Pfam | 160 | 276 | IPR000477 | Reverse transcriptase domain | ||
| aacu_s0062.g17.t1 | CDD | 299 | 400 | ||||
| aacu_s0062.g17.t1 | PANTHER | 304 | 527 |
Transcript
| Transcript ID | aacu_s0062.g17.t1 |
|---|---|
| Definition | - |
>aacu_s0062.g17.t1 tctgatctacatgctaccaaaatggaggaagcgtctgttacgtccaggcaggtgaacaagatttgtagtgggtctcaaag gtcaaatgagaaaatcaggggaagttcgcggtcgcgtcgaccaacgaatgcgaggaattcacgagcacccagccatgaca agaggccagttgtctgtttttgttgtggacgtccgggtcatcgcgcaaaagattcttcttgtcctgcagtcggaaaaact tgcagtaactgtggaaagcaagggcattttgcaggagtttgcaaaagcgctccgaaagagtcactgattctccgaacatt gcataccaacggaatgcaaatgaccttcgatattacaccagttgcgcaaccacagcgccaccttccatttcataatcgca aagatctagatgtggagaaaaaactccaggaattacaagatcttgatattattgaggatatagaaggcccgacgctttgg gtttcacctctggtcgctgtcccaaagtccaatggcgatgtacgtgtgtgtgtcgatatgcgtcgcgcaaatgaagcggt catccgcgagcgacatccagtcccaacgttggaggaaatgttagcagcccttaatggagcggctgtgttctccaagcttg atcttcgatggggctatgatcagattgaattgcacccagagtcaagagtgctcactacgttctcgacacacaagggactt aagcgttataaacgcttaatatttggtttgtcgtcggcaccagaaatgtaccagtatgtgattcagcgaactcttcaagg aattcccggagttagaaacatttctgatgatattgttgtgtttggctctgaccaaggcagtcaagacaggagtctggaac tgtcgcgtctcgagaacattgaaccgggaaaacgaagtggcgacagtgttcgtcctgtgggatatgcaagtcgcacatta acagatgttgagaggcgctactctcagactgaaaagaaggcgctggcggttttctgggcctgtgaacgtttccatattta cctatatggcaaactgtttaccctgtacacagactacaagcagctggagctcatctacagccccaagtcaaagctacctc cccggattgaacgatgggcacttagattgcagccgtacacatttaaagttgtacacatggcaggaaagacagacccagcc gatgtcctctcaagattgcctctggaaaaccagcccttctgggaaaggaatattgcggaagagtacatcaattacgttac ggtaaacgcagttccaaaagcactcactcttaagcagattgcatgtgctactgagacagatccgatactacagcaggaac aaaaatgtttgggtggatctgagtggccagacacacctgagcttaacccatacaagcgcttcaaagatgaactgtgcatg cgcaatgggattgttctgcgagggtctcgaattgtgatgccaaggatgctctggcaagcaaccctatctaatgcgcacga gggccaccagggaattgtgcgaaccaaacagatggtccgggagaatgtgtggtggcaaggcatcgcccaacaagtcgaga caatgttcgttgctgtgaaacgagaacgattgtttaactctcaacccacggcgatttttttccaagcgcttgactctctg gttctgcagcaggagtccttgcagactttggctgttctgtggacgatggagatttcgacatacaatttcaacgttgttga atttcgcattcgacagaatctttttcaatgttggcaacggggttttaaagtcgcttgcaagaaactgacaagctcaacgg cgttccgaatctttaatgcacattttgcacagactctgggggaatatgatttagattgccggaggagtgaaccgtcccag gtcttcagataaaagtttgtccagtggccgtttctcaacacctttcttgccagtaattttaactaagttgtccgtggata tgtgctgaaatttgtcgcgtttttgtactccaaataaacaccaacaaagtcg |
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Protein
| Protein ID | aacu_s0062.g17.t1 |
|---|---|
| Definition | - |
>aacu_s0062.g17.t1 MEEASVTSRQVNKICSGSQRSNEKIRGSSRSRRPTNARNSRAPSHDKRPVVCFCCGRPGHRAKDSSCPAVGKTCSNCGKQ GHFAGVCKSAPKESLILRTLHTNGMQMTFDITPVAQPQRHLPFHNRKDLDVEKKLQELQDLDIIEDIEGPTLWVSPLVAV PKSNGDVRVCVDMRRANEAVIRERHPVPTLEEMLAALNGAAVFSKLDLRWGYDQIELHPESRVLTTFSTHKGLKRYKRLI FGLSSAPEMYQYVIQRTLQGIPGVRNISDDIVVFGSDQGSQDRSLELSRLENIEPGKRSGDSVRPVGYASRTLTDVERRY SQTEKKALAVFWACERFHIYLYGKLFTLYTDYKQLELIYSPKSKLPPRIERWALRLQPYTFKVVHMAGKTDPADVLSRLP LENQPFWERNIAEEYINYVTVNAVPKALTLKQIACATETDPILQQEQKCLGGSEWPDTPELNPYKRFKDELCMRNGIVLR GSRIVMPRMLWQATLSNAHEGHQGIVRTKQMVRENVWWQGIAQQVETMFVAVKRERLFNSQPTAIFFQALDSLVLQQESL QTLAVLWTMEISTYNFNVVEFRIRQNLFQCWQRGFKVACKKLTSSTAFRIFNAHFAQTLGEYDLDCRRSEPSQVFR |
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