Gene
| Gene Model ID | aacu_s0062.g24 |
|---|---|
| Locus | sc0000062 : 599904 ... 608829 : - |
| To GenomeBrowser | sc0000062:599904..608829 |
| Genes list of scaffold | sc0000062 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| aacu_s0062.g24.t1 | 1 | 1 | rve | 1039 | 1127 | 3.0e-14 | 53.1 | 2.7e-17 | 7.2e-14 | 51.9 |
Results of InterPro Scan
| Gene Model ID | Analysis | Start | End | i_acc | i_desc | GO | Pathway |
|---|---|---|---|---|---|---|---|
| aacu_s0062.g24.t1 | Coils | 2 | 22 | ||||
| aacu_s0062.g24.t1 | Gene3D | 359 | 486 | IPR021109 | Aspartic peptidase domain s... | ||
| aacu_s0062.g24.t1 | SUPERFAMILY | 379 | 435 | IPR021109 | Aspartic peptidase domain s... | ||
| aacu_s0062.g24.t1 | PANTHER | 380 | 413 | ||||
| aacu_s0062.g24.t1 | PANTHER | 380 | 413 | ||||
| aacu_s0062.g24.t1 | ProSitePatterns | 381 | 392 | IPR001969 | Aspartic peptidase, active ... | GO:0004190|GO:0006508 | |
| aacu_s0062.g24.t1 | CDD | 381 | 453 | ||||
| aacu_s0062.g24.t1 | Coils | 603 | 623 | ||||
| aacu_s0062.g24.t1 | Gene3D | 607 | 760 | ||||
| aacu_s0062.g24.t1 | SUPERFAMILY | 613 | 759 | ||||
| aacu_s0062.g24.t1 | PANTHER | 764 | 834 | ||||
| aacu_s0062.g24.t1 | PANTHER | 764 | 834 | ||||
| aacu_s0062.g24.t1 | Gene3D | 784 | 841 | ||||
| aacu_s0062.g24.t1 | PANTHER | 835 | 1135 | ||||
| aacu_s0062.g24.t1 | PANTHER | 835 | 1135 | ||||
| aacu_s0062.g24.t1 | Gene3D | 1013 | 1137 | IPR036397 | Ribonuclease H superfamily | GO:0003676 | |
| aacu_s0062.g24.t1 | ProSiteProfiles | 1020 | 1138 | IPR001584 | Integrase, catalytic core | GO:0015074 | |
| aacu_s0062.g24.t1 | SUPERFAMILY | 1022 | 1133 | IPR012337 | Ribonuclease H-like superfa... | ||
| aacu_s0062.g24.t1 | Pfam | 1039 | 1127 | IPR001584 | Integrase, catalytic core | GO:0015074 |
Transcript
| Transcript ID | aacu_s0062.g24.t1 |
|---|---|
| Definition | - |
>aacu_s0062.g24.t1 atggttgatggctcccatgtgctttgacctgtgtggaaagtagatccacagcccgataatggtcgaagaagagttgaaag aagcgaagaagatccggaggaacgcaaaagcagccatcacaaaaagtggtaactcgttgaataacgtaattgaagttaaa agaccaggatcagaggtaagagatgccttaaataaagtcgagaaagcgtacgatgagctggtagtcaagcatgaagactg cacgaaactcatagatgatgatacgaagtttgaagaagctgaaaattggatggaagaatgtcagggctccctcatgaact atgtaatgcgagctaagatgtatcttgaaagcctagttagccaagaaaatcaaagtttggaaagtaatgctgctactgaa aaaattacaagtaatgagtcaatccccatcggaatttcaagtatgcaatctggaatggatgtggtttccggccccacctc tcatgacacgataacgcatgatagcgttaagttccgcacactgcaggacggagaagatgcaagattctgtgttttggcac atttagttaggcgctgttttaacactcttaaggaagtgggcgttcccagcgatatggataatagccatatgttgtccatt attgaacaaaaaatgtgcgctgacgatcgaaaagtgtggtctagagaactggaacgagacggaaagaacgcgacgttaca aggactcatagattggatgacagtaaagatgacgtcacgcatgcgtgcaacagcgccactaagaaccggttcaagcactc gttcagtgaaccacttcatgaaagatgacagcggtaaaggcaacgcagtatggcacaaatgctggatgtgtcgaaattca gcccattggccagaccaatgtccgaagtttgctgctctcagcgtcgacgagcgactcaagatggccaaagagaatcatgt gtgcttcggatgccttaagagagccggaagagaacaccggatggaaaattgcacccgaaggcaacgttgcacaaaacagg agaacggaaaacaatgcgaacattatcaccatccacttcttcacaaaagcaatgcaatcagattaggcgtggcagctgtc gcggccggtaagggagcactccttccagttatctcagcaatcattcacggtcagaacgggattcagaaaaaaggaaacat cctcctcgatactggcgctcaagtaagtctcatccggtccgacattgcggagttacttggactcagaggaagggacacct ctgtaaccatatcaaaggttggtggagaagaggaaaccataaggacaaaggaataccgagtacctgtcagttctggagat gattacaagaagtattcgataactgccattggaatcccaaacatcagtgatgacgtcgctccagctccaattacacagat caccgaactcctgggactatccagtgagaagattagacgtggaaagggatccatttatatcctcataggcattgaccatg ccaacatgcatacaggtcaaactagacaagcaggagagcttgtagcaagacaaacaccactgggatgggtagtatttgga ggctcatcaggaaactttgaaccagcgaatcgcatactgtttgtcaagcacgctacacccgtggacctatccgacttctg gaaaacagagtccatgggggtccaggtaaagccatgtgtctgtgaagcagacaagctgagccaagtggaaagagaggaag ccgaaatcattagcaagtcttgtcaaaaaattgggcagcagcggatgattccttatccttggaggaaggatccgaagttt cttcctgataacagatcgctggcactgaaacggttggaaggaaccgaacgtcgcctaaagtcgaacctggatcaagccaa tgcatatgacgagcaaatgaccgaaatggtgaagatgaatttctgcaggaaattatcagaaaacgaaatgaagaattaca aaggccctgtacattacataccgcaccacgcagtaatcaggccagaaaagaaaagcacgcccgtccgtattgtttttaat tcgtcttccgtgttccagggtcacaaattgaatgactattggatgaagggcccagacttgctgaacaatctattcggcgt ggtcctgcgtcttagaggaaaggaagtcactctggttggagatatatcgaagatataccatcgcatcttaatacccgaac cagatcagcatgttcaccgtttcttatggagaaacctcgaaacctcccgcgaaccagatgtgtatgtgaaaactgtactc accttcgaactacacacaccactcaccatgacaaacattctgagtaagtaccctgatgtgtttgataacagtgtaggaaa gctggaaggtgaactgcacctctacacgaaacaagatgttactccgtcgaaagcagctcccagggagattctcctgtcgg tcaaaaacaaattcattgccgaaatcaaagatcttcaagaacaaggcattatcgaaaaagtaactgaacccactgattgg agaatgctgtgccgcattatgggatatgattttgacttcaagtacatcaaaggcaaagacctgctaattgccgatgccct tagtagatcccacacgactaatcacactcgcagccagagcgaagaagagattgaaaccatcggcttggttattcaagatc aaagtgtgacaagccacctcaaagaaattgcagaggaaactgccaaggacaatgtcctacagtcggtaatccgcctcatc tctgaaaattggtccatcagtaaaagacgtattccaaccgaagtctttccattctggagttgcaaagatcaactatcatt caatgatggcatcatctacagaggtgatcgtattgttgtgccagttacactgagaaagagcctaactgaaaagttacatc gagctcacatgggtgttgagtcaactttaagacgagctcgtacatctctttggtggcccggtatgaactctcagctgaaa cagttcatatcttcatgtcaagtttgtcagtccttccagagaaacaacccgaaagaaaccttgatgagtcattgtattcc tgatagaccctggtctaaaatcgcagccgacccttttgagtttaaaggagaacactatctagtattggtcgactattaca gcgactggatcgaatttgataagatgagagaccaaactgcagccgaaacgattgccctgctactcaaacagttctcacga tggggacttcccggtgagattgtcactgactgtggaaagaattttgactctctagaattctcacaattttgtcagcggaa gcagataaaacacacaaaatcctcacctcaccatcatcagagtaatggcaaagcggaatcggctgtgaagatcgccaaat ctatcttgagaaagactgaaaactctgctttttaaagcagggttttcagtcttttaaaaatccttacgaagccctacttg atcaacataacacacctacagttgatatgacgacatcacctgctcaaagatttctacaccgaagactgaaatctgagatt cctatgaaagccactctacttacaccggaaattgctgaaacagttctgaaagaaaaaactaagaagaca |
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Protein
| Protein ID | aacu_s0062.g24.t1 |
|---|---|
| Definition | - |
>aacu_s0062.g24.t1 MVEEELKEAKKIRRNAKAAITKSGNSLNNVIEVKRPGSEVRDALNKVEKAYDELVVKHEDCTKLIDDDTKFEEAENWMEE CQGSLMNYVMRAKMYLESLVSQENQSLESNAATEKITSNESIPIGISSMQSGMDVVSGPTSHDTITHDSVKFRTLQDGED ARFCVLAHLVRRCFNTLKEVGVPSDMDNSHMLSIIEQKMCADDRKVWSRELERDGKNATLQGLIDWMTVKMTSRMRATAP LRTGSSTRSVNHFMKDDSGKGNAVWHKCWMCRNSAHWPDQCPKFAALSVDERLKMAKENHVCFGCLKRAGREHRMENCTR RQRCTKQENGKQCEHYHHPLLHKSNAIRLGVAAVAAGKGALLPVISAIIHGQNGIQKKGNILLDTGAQVSLIRSDIAELL GLRGRDTSVTISKVGGEEETIRTKEYRVPVSSGDDYKKYSITAIGIPNISDDVAPAPITQITELLGLSSEKIRRGKGSIY ILIGIDHANMHTGQTRQAGELVARQTPLGWVVFGGSSGNFEPANRILFVKHATPVDLSDFWKTESMGVQVKPCVCEADKL SQVEREEAEIISKSCQKIGQQRMIPYPWRKDPKFLPDNRSLALKRLEGTERRLKSNLDQANAYDEQMTEMVKMNFCRKLS ENEMKNYKGPVHYIPHHAVIRPEKKSTPVRIVFNSSSVFQGHKLNDYWMKGPDLLNNLFGVVLRLRGKEVTLVGDISKIY HRILIPEPDQHVHRFLWRNLETSREPDVYVKTVLTFELHTPLTMTNILSKYPDVFDNSVGKLEGELHLYTKQDVTPSKAA PREILLSVKNKFIAEIKDLQEQGIIEKVTEPTDWRMLCRIMGYDFDFKYIKGKDLLIADALSRSHTTNHTRSQSEEEIET IGLVIQDQSVTSHLKEIAEETAKDNVLQSVIRLISENWSISKRRIPTEVFPFWSCKDQLSFNDGIIYRGDRIVVPVTLRK SLTEKLHRAHMGVESTLRRARTSLWWPGMNSQLKQFISSCQVCQSFQRNNPKETLMSHCIPDRPWSKIAADPFEFKGEHY LVLVDYYSDWIEFDKMRDQTAAETIALLLKQFSRWGLPGEIVTDCGKNFDSLEFSQFCQRKQIKHTKSSPHHHQSNGKAE SAVKIAKSILRKTENSAF |
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