Acropora acuminata ver. 1.0

OIST Marine Genomics Unit since 2008

Gene
Gene Model IDaacu_s0062.g4
Locus sc0000062 : 52726 ... 57395 : +
To GenomeBrowser sc0000062:52726..57395
Genes list of scaffold sc0000062

Hmmer Search for Pfam
query Total ID Target From To Eval Score cEval iEval Score
aacu_s0062.g4.t1 6 1 zf-C2H2_4 25 47 2.1e-40 133.8 6.0e-06 0.0098 16.5
aacu_s0062.g4.t1 10 1 zf-C2H2 25 47 0.0 155.8 2.8e-06 0.0046 17.2
aacu_s0062.g4.t1 13 1 zf-H2C2_2 41 64 0.0 282.7 5.1e-10 8.4e-07 29.0
aacu_s0062.g4.t1 6 2 zf-C2H2_4 53 75 2.1e-40 133.8 1.3e-06 0.0021 18.6
aacu_s0062.g4.t1 3 1 zf-C2H2_jaz 53 75 5.5e-22 77.4 9.4e-06 0.015 15.4
aacu_s0062.g4.t1 10 2 zf-C2H2 53 75 0.0 155.8 5.7e-06 0.0093 16.2
aacu_s0062.g4.t1 13 2 zf-H2C2_2 67 92 0.0 282.7 1.4e-08 2.2e-05 24.5
aacu_s0062.g4.t1 10 3 zf-C2H2 81 103 0.0 155.8 5.1e-06 0.0083 16.4
aacu_s0062.g4.t1 13 3 zf-H2C2_2 98 120 0.0 282.7 3.4e-08 5.5e-05 23.3
aacu_s0062.g4.t1 2 1 zf-C2H2_6 108 132 5.4e-17 61.2 7.1e-06 0.012 15.5
aacu_s0062.g4.t1 10 4 zf-C2H2 109 131 0.0 155.8 1.4e-06 0.0022 18.2
aacu_s0062.g4.t1 6 3 zf-C2H2_4 109 131 2.1e-40 133.8 1.5e-06 0.0024 18.4
aacu_s0062.g4.t1 13 4 zf-H2C2_2 123 148 0.0 282.7 2.7e-09 4.4e-06 26.8
aacu_s0062.g4.t1 10 5 zf-C2H2 137 159 0.0 155.8 5.7e-07 0.00092 19.4
aacu_s0062.g4.t1 6 4 zf-C2H2_4 137 159 2.1e-40 133.8 4.1e-07 0.00067 20.2
aacu_s0062.g4.t1 13 5 zf-H2C2_2 151 175 0.0 282.7 2.7e-10 4.4e-07 29.9
aacu_s0062.g4.t1 10 6 zf-C2H2 165 187 0.0 155.8 8.9e-06 0.014 15.6
aacu_s0062.g4.t1 13 6 zf-H2C2_2 180 203 0.0 282.7 1.1e-08 1.9e-05 24.8
aacu_s0062.g4.t1 10 7 zf-C2H2 193 215 0.0 155.8 1.3e-08 2.2e-05 24.5
aacu_s0062.g4.t1 6 5 zf-C2H2_4 193 215 2.1e-40 133.8 3.1e-06 0.0051 17.4
aacu_s0062.g4.t1 2 2 zf-C2H2_6 193 217 5.4e-17 61.2 1.0e-05 0.016 15.0
aacu_s0062.g4.t1 13 7 zf-H2C2_2 207 231 0.0 282.7 2.9e-09 4.7e-06 26.7
aacu_s0062.g4.t1 10 8 zf-C2H2 221 243 0.0 155.8 3.6e-06 0.0058 16.9
aacu_s0062.g4.t1 13 8 zf-H2C2_2 236 258 0.0 282.7 5.2e-08 8.5e-05 22.7
aacu_s0062.g4.t1 13 9 zf-H2C2_2 267 288 0.0 282.7 7.3e-10 1.2e-06 28.6
aacu_s0062.g4.t1 10 9 zf-C2H2 277 299 0.0 155.8 1.3e-06 0.0021 18.3
aacu_s0062.g4.t1 6 6 zf-C2H2_4 277 299 2.1e-40 133.8 1.6e-06 0.0027 18.3
aacu_s0062.g4.t1 3 2 zf-C2H2_jaz 277 297 5.5e-22 77.4 5.1e-07 0.00083 19.5
aacu_s0062.g4.t1 13 10 zf-H2C2_2 323 343 0.0 282.7 2.1e-10 3.5e-07 30.3
aacu_s0062.g4.t1 10 10 zf-C2H2 334 356 0.0 155.8 1.1e-07 0.00018 21.7
aacu_s0062.g4.t1 13 11 zf-H2C2_2 349 373 0.0 282.7 9.2e-06 0.015 15.6
aacu_s0062.g4.t1 3 3 zf-C2H2_jaz 449 471 5.5e-22 77.4 4.6e-07 0.00076 19.6
aacu_s0062.g4.t1 13 12 zf-H2C2_2 463 486 0.0 282.7 1.6e-08 2.6e-05 24.4
aacu_s0062.g4.t1 13 13 zf-H2C2_2 495 515 0.0 282.7 3.1e-08 5.0e-05 23.4

Results of InterPro Scan
Gene Model ID Analysis Start End i_acc i_desc GO Pathway
aacu_s0062.g4.t1 MobiDBLite 1 22
aacu_s0062.g4.t1 Gene3D 23 46
aacu_s0062.g4.t1 SUPERFAMILY 23 75 IPR036236 Zinc finger C2H2 superfamily
aacu_s0062.g4.t1 Pfam 25 47
aacu_s0062.g4.t1 SMART 25 47 IPR013087 Zinc finger C2H2-type GO:0003676
aacu_s0062.g4.t1 ProSiteProfiles 25 52 IPR013087 Zinc finger C2H2-type GO:0003676
aacu_s0062.g4.t1 ProSitePatterns 27 47 IPR013087 Zinc finger C2H2-type GO:0003676
aacu_s0062.g4.t1 Gene3D 47 58
aacu_s0062.g4.t1 ProSiteProfiles 53 80 IPR013087 Zinc finger C2H2-type GO:0003676
aacu_s0062.g4.t1 Pfam 53 75
aacu_s0062.g4.t1 SMART 53 75 IPR013087 Zinc finger C2H2-type GO:0003676
aacu_s0062.g4.t1 ProSitePatterns 55 75 IPR013087 Zinc finger C2H2-type GO:0003676
aacu_s0062.g4.t1 Gene3D 59 73
aacu_s0062.g4.t1 SUPERFAMILY 62 118 IPR036236 Zinc finger C2H2 superfamily
aacu_s0062.g4.t1 Gene3D 74 107
aacu_s0062.g4.t1 Pfam 81 103
aacu_s0062.g4.t1 SMART 81 103 IPR013087 Zinc finger C2H2-type GO:0003676
aacu_s0062.g4.t1 ProSiteProfiles 81 108 IPR013087 Zinc finger C2H2-type GO:0003676
aacu_s0062.g4.t1 ProSitePatterns 83 103 IPR013087 Zinc finger C2H2-type GO:0003676
aacu_s0062.g4.t1 Gene3D 108 140
aacu_s0062.g4.t1 Pfam 109 131
aacu_s0062.g4.t1 SMART 109 131 IPR013087 Zinc finger C2H2-type GO:0003676
aacu_s0062.g4.t1 ProSiteProfiles 109 136 IPR013087 Zinc finger C2H2-type GO:0003676
aacu_s0062.g4.t1 ProSitePatterns 111 131 IPR013087 Zinc finger C2H2-type GO:0003676
aacu_s0062.g4.t1 SUPERFAMILY 117 174 IPR036236 Zinc finger C2H2 superfamily
aacu_s0062.g4.t1 ProSiteProfiles 137 164 IPR013087 Zinc finger C2H2-type GO:0003676
aacu_s0062.g4.t1 SMART 137 159 IPR013087 Zinc finger C2H2-type GO:0003676
aacu_s0062.g4.t1 Pfam 137 159
aacu_s0062.g4.t1 ProSitePatterns 139 159 IPR013087 Zinc finger C2H2-type GO:0003676
aacu_s0062.g4.t1 Gene3D 141 155
aacu_s0062.g4.t1 Gene3D 156 191
aacu_s0062.g4.t1 ProSiteProfiles 165 192 IPR013087 Zinc finger C2H2-type GO:0003676
aacu_s0062.g4.t1 Pfam 165 187
aacu_s0062.g4.t1 SMART 165 187 IPR013087 Zinc finger C2H2-type GO:0003676
aacu_s0062.g4.t1 ProSitePatterns 167 187 IPR013087 Zinc finger C2H2-type GO:0003676
aacu_s0062.g4.t1 SUPERFAMILY 173 230 IPR036236 Zinc finger C2H2 superfamily
aacu_s0062.g4.t1 Gene3D 192 206
aacu_s0062.g4.t1 Pfam 193 215
aacu_s0062.g4.t1 ProSiteProfiles 193 220 IPR013087 Zinc finger C2H2-type GO:0003676
aacu_s0062.g4.t1 SMART 193 215 IPR013087 Zinc finger C2H2-type GO:0003676
aacu_s0062.g4.t1 ProSitePatterns 195 215 IPR013087 Zinc finger C2H2-type GO:0003676
aacu_s0062.g4.t1 Gene3D 207 233
aacu_s0062.g4.t1 ProSiteProfiles 221 248 IPR013087 Zinc finger C2H2-type GO:0003676
aacu_s0062.g4.t1 Pfam 221 243
aacu_s0062.g4.t1 SMART 221 243 IPR013087 Zinc finger C2H2-type GO:0003676
aacu_s0062.g4.t1 ProSitePatterns 223 243 IPR013087 Zinc finger C2H2-type GO:0003676
aacu_s0062.g4.t1 SUPERFAMILY 230 286 IPR036236 Zinc finger C2H2 superfamily
aacu_s0062.g4.t1 Gene3D 234 253
aacu_s0062.g4.t1 ProSiteProfiles 249 276 IPR013087 Zinc finger C2H2-type GO:0003676
aacu_s0062.g4.t1 SMART 249 271 IPR013087 Zinc finger C2H2-type GO:0003676
aacu_s0062.g4.t1 ProSitePatterns 251 271 IPR013087 Zinc finger C2H2-type GO:0003676
aacu_s0062.g4.t1 Gene3D 254 267
aacu_s0062.g4.t1 Gene3D 268 281
aacu_s0062.g4.t1 Pfam 277 299
aacu_s0062.g4.t1 SMART 277 299 IPR013087 Zinc finger C2H2-type GO:0003676
aacu_s0062.g4.t1 ProSiteProfiles 277 304 IPR013087 Zinc finger C2H2-type GO:0003676
aacu_s0062.g4.t1 ProSitePatterns 279 299 IPR013087 Zinc finger C2H2-type GO:0003676
aacu_s0062.g4.t1 Gene3D 282 293
aacu_s0062.g4.t1 SUPERFAMILY 285 343 IPR036236 Zinc finger C2H2 superfamily
aacu_s0062.g4.t1 Gene3D 294 312
aacu_s0062.g4.t1 ProSiteProfiles 305 333 IPR013087 Zinc finger C2H2-type GO:0003676
aacu_s0062.g4.t1 SMART 305 328 IPR013087 Zinc finger C2H2-type GO:0003676
aacu_s0062.g4.t1 ProSitePatterns 307 328 IPR013087 Zinc finger C2H2-type GO:0003676
aacu_s0062.g4.t1 Gene3D 313 328
aacu_s0062.g4.t1 SUPERFAMILY 328 380 IPR036236 Zinc finger C2H2 superfamily
aacu_s0062.g4.t1 Gene3D 329 346
aacu_s0062.g4.t1 ProSiteProfiles 334 361 IPR013087 Zinc finger C2H2-type GO:0003676
aacu_s0062.g4.t1 Pfam 334 356
aacu_s0062.g4.t1 SMART 334 356 IPR013087 Zinc finger C2H2-type GO:0003676
aacu_s0062.g4.t1 ProSitePatterns 336 356 IPR013087 Zinc finger C2H2-type GO:0003676
aacu_s0062.g4.t1 Gene3D 347 370
aacu_s0062.g4.t1 ProSiteProfiles 362 389 IPR013087 Zinc finger C2H2-type GO:0003676
aacu_s0062.g4.t1 SMART 362 384 IPR013087 Zinc finger C2H2-type GO:0003676
aacu_s0062.g4.t1 ProSitePatterns 364 384 IPR013087 Zinc finger C2H2-type GO:0003676
aacu_s0062.g4.t1 Gene3D 371 413 IPR013083 Zinc finger, RING/FYVE/PHD-...
aacu_s0062.g4.t1 MobiDBLite 378 418
aacu_s0062.g4.t1 Gene3D 414 461 IPR013083 Zinc finger, RING/FYVE/PHD-...
aacu_s0062.g4.t1 PANTHER 441 532
aacu_s0062.g4.t1 SUPERFAMILY 446 505 IPR036236 Zinc finger C2H2 superfamily
aacu_s0062.g4.t1 ProSiteProfiles 449 476 IPR013087 Zinc finger C2H2-type GO:0003676
aacu_s0062.g4.t1 SMART 449 471 IPR013087 Zinc finger C2H2-type GO:0003676
aacu_s0062.g4.t1 ProSitePatterns 451 471 IPR013087 Zinc finger C2H2-type GO:0003676
aacu_s0062.g4.t1 Gene3D 462 482
aacu_s0062.g4.t1 SMART 477 499 IPR013087 Zinc finger C2H2-type GO:0003676
aacu_s0062.g4.t1 ProSiteProfiles 477 504 IPR013087 Zinc finger C2H2-type GO:0003676
aacu_s0062.g4.t1 ProSitePatterns 479 499 IPR013087 Zinc finger C2H2-type GO:0003676
aacu_s0062.g4.t1 Gene3D 483 501 IPR013083 Zinc finger, RING/FYVE/PHD-...
aacu_s0062.g4.t1 SUPERFAMILY 494 530 IPR036236 Zinc finger C2H2 superfamily
aacu_s0062.g4.t1 Gene3D 502 542
aacu_s0062.g4.t1 ProSiteProfiles 505 532 IPR013087 Zinc finger C2H2-type GO:0003676
aacu_s0062.g4.t1 SMART 505 527 IPR013087 Zinc finger C2H2-type GO:0003676
aacu_s0062.g4.t1 ProSitePatterns 507 527 IPR013087 Zinc finger C2H2-type GO:0003676

Blast Hit to nr / sp
query Subject ID Subject Name evalue
aacu_s0062.g4.t1 sp|Q4V348|Z658B_HUMAN Zinc finger protein 658B 0.0
aacu_s0062.g4.t1 sp|Q5TYW1|ZN658_HUMAN Zinc finger protein 658 0.0
aacu_s0062.g4.t1 sp|Q5R5U3|ZN271_PONAB Zinc finger protein 271 0.0
aacu_s0062.g4.t1 sp|A2VDQ7|ZN420_BOVIN Zinc finger protein 420 0.0
aacu_s0062.g4.t1 sp|Q5R8X1|ZN665_PONAB Zinc finger protein 665 0.0

Transcript
Transcript IDaacu_s0062.g4.t1
Definition- 
>aacu_s0062.g4.t1
cgtgctaaaatttacttcaaaagattcaaaagtagcttggaaactcaagcaattgaatgaaatcagcgtgttccagcctg
ccagcagaacttttcttaactttataagcaagggaccatctctgaactttgaaagcattttgaacatgtctttgatagat
caagaaacaagccctggccagcaaccacaagacaataataattctccagctaaacattacaaatgcagctattgcagcaa
ggtattgaagacgtctgctggttggagatcgcacgagagactgcataccgaagaaaaaccatacaaatgtagccattgcg
acaagcaattcacaagtgctcccggactgaaataccatgagaaaagtcatgaaggtcttaaaccataccagtgcagtcac
tgcaacaagtgttttgctacttcatcaatgcaaaagagccatgaaaaagttcatactggtgttaaagctttcaaatgcag
ccaatgtgatcggtcatttgcaagtaagcctgccttaacttatcatgagaacaggcacaggggcctaaaaccatttcaat
gtagtcattgcggcaaggcctttgcttcctcagcagggttaaagtaccatgaaaaaattcataccggtgagaaagctttt
aaatgcagtcaatgtgaccaagcatttataacattatctgttctaaaaagtcatgaaagtgttcatagtggtgtaaaacc
atttaagtgcagccaatgtgacatggcatttgcaagatcatctaatcttagaagtcatgaacgaagtcattctgacacaa
agccatataaatgcagttattgtgcaaaaatgtttggaaggaagtctgttctcaaacgacatgaggaaattcatagtggt
ataaaaccacaccaatgtagccattgcgacaaggcattttttcgaaaacgaaattgcttgattcatgaaagaatgcatac
tggagaaaggccgttcaaatgcattcactgcgacaaatcgtttgttacatcatatagcctcaagatacatgaaaggatac
atactggtgactgccgttataaatgtcattattgtggacagggattcatacagtgtgaagctcgtaacattcatgaaaga
aaaatgcatacgggtgagaaaccataccaatgcgaaatttgtgacaagagattcatttatgcaggcagccttgtaataca
caagagaacccatagtgatgaaaagccatttaaatgtgttcgctgcgatttaaggtttgcacataagaacagtcatacca
gacatgaggcatcacatgcaagagatcaagacaatatgacaagctcttctgaaaaagtgaatagaaaattgcagagcaac
aagacaccaaattctagagcaaaacaatccgaaaagagtgttcaggttaatttaaattgtgagaaaaaaactgaaggtgc
aaactcatgtgacatagtagcagaaaaagcagacagtgaagaaaagggtcacaggtgcaaatactgcaataagtggttta
aaaagatgtataattataaaatacatgaacggacacacactggagaaaagccatttgcatgtagattctgtggcaagtgt
tatagtgatccaagttactgcaaagttcatgaaaggatacacactggagaaaagcgttttaagtgtgcattttgccccaa
gcggtttataacttcaacaagtcgctatagccatgagagggtacacacaaaggagaaacaaattggtgcagccattgtcg
tcagtcctttctcagaataatcattaattttagttgaggtattttgtgtaataaacaataatttgaattaattttttgcc
aactttttgatgagccaggcctcattttccaatgattattaaaagttgtttggctgg

Protein
Protein IDaacu_s0062.g4.t1
Definition- 
>aacu_s0062.g4.t1
MSLIDQETSPGQQPQDNNNSPAKHYKCSYCSKVLKTSAGWRSHERLHTEEKPYKCSHCDKQFTSAPGLKYHEKSHEGLKP
YQCSHCNKCFATSSMQKSHEKVHTGVKAFKCSQCDRSFASKPALTYHENRHRGLKPFQCSHCGKAFASSAGLKYHEKIHT
GEKAFKCSQCDQAFITLSVLKSHESVHSGVKPFKCSQCDMAFARSSNLRSHERSHSDTKPYKCSYCAKMFGRKSVLKRHE
EIHSGIKPHQCSHCDKAFFRKRNCLIHERMHTGERPFKCIHCDKSFVTSYSLKIHERIHTGDCRYKCHYCGQGFIQCEAR
NIHERKMHTGEKPYQCEICDKRFIYAGSLVIHKRTHSDEKPFKCVRCDLRFAHKNSHTRHEASHARDQDNMTSSSEKVNR
KLQSNKTPNSRAKQSEKSVQVNLNCEKKTEGANSCDIVAEKADSEEKGHRCKYCNKWFKKMYNYKIHERTHTGEKPFACR
FCGKCYSDPSYCKVHERIHTGEKRFKCAFCPKRFITSTSRYSHERVHTKEKQIGAAIVVSPFSE

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