Gene
| Gene Model ID | aacu_s0062.g41 |
|---|---|
| Locus | sc0000062 : 1032859 ... 1058469 : - |
| To GenomeBrowser | sc0000062:1032859..1058469 |
| Genes list of scaffold | sc0000062 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| aacu_s0062.g41.t1 | 1 | 1 | RVT_1 | 2 | 79 | 1.1e-06 | 28.2 | 2.9e-09 | 1.2e-05 | 24.8 |
| aacu_s0062.g41.t1 | 1 | 1 | DUF1759 | 711 | 846 | 1.3e-08 | 34.8 | 5.4e-12 | 2.2e-08 | 34.0 |
| aacu_s0062.g41.t1 | 1 | 1 | Peptidase_A17 | 1164 | 1313 | 3.2e-37 | 127.9 | 8.1e-40 | 3.3e-36 | 124.6 |
Results of InterPro Scan
| Gene Model ID | Analysis | Start | End | i_acc | i_desc | GO | Pathway |
|---|---|---|---|---|---|---|---|
| aacu_s0062.g41.t1 | Gene3D | 1 | 89 | ||||
| aacu_s0062.g41.t1 | MobiDBLite | 347 | 368 | ||||
| aacu_s0062.g41.t1 | Coils | 543 | 563 | ||||
| aacu_s0062.g41.t1 | Coils | 573 | 600 | ||||
| aacu_s0062.g41.t1 | MobiDBLite | 598 | 648 | ||||
| aacu_s0062.g41.t1 | Pfam | 711 | 846 | IPR005312 | Protein of unknown function... | ||
| aacu_s0062.g41.t1 | Pfam | 1164 | 1313 | IPR008042 | Retrotransposon, Pao | ||
| aacu_s0062.g41.t1 | PANTHER | 1184 | 1385 |
Transcript
| Transcript ID | aacu_s0062.g41.t1 |
|---|---|
| Definition | - |
>aacu_s0062.g41.t1 ctggtaaatgattttttatcagatcctatcccgctagctcgaggcgtaaggcaaggtgacgctttgtcgcctatgcttta tgtcctatgcgtagaagttctagcatgtaaaatcagagcgaccaatgacatcgaggcctttctccttccaggcgctggtg gcctacaatttaaggtctgccagtatgcagatgacaccacggctttcgtcaagaatgaaaaatctcttttcgcgcctttt gaggccatctcgcagtttgaacgtggatctggagctaaattaaatagatccaaaacggaggccttgtggctgggcgcgtg gaaagacaggccagaccagccgctgggcctctcgtggaatgcttcaggtgaagggcttgttggaagggaaggagtacaac tcagttgtgtctcgagacatggaatgccggaacgatctccagtggtggatcgatcagctgtcgatatggaatgggaggtc attaatctcaccagccctcgatttgattattacaacagatgcatccttgaagggctggggggctgtgtgtcagggagttc acaccaagggactttggacccaggaggaatccttactgcatataaatgccctagaactcaaggcagctctttttgccttg agagctttctccaagagtcgaaggaaacttcatgtccatctccgaatggacaactgaacagcagttgcatacctactaaa aatgggggagacacggtctctggtactagtagggatggcccaggagctttgggaatatgctctggggaaggaaatttccc tgacggcagaatacttgccagaccaggtatggggcccccgatccatagatctctttgcggatcgcatgaatacacaactt cggaattatgtgagttggttccccgacccctttgctcaggcgacagatgcctctcagatcccttggtcgaatctgaaggg ttactgcttcccccctttctgactgatttgtcgttgcctggcaaagataaggaaggatcagggaacaatggttttgatag catcaacctggcatgcacaggcatggtacccagtcctgttagagatgtcttgcagacatccgattctactttccccgctg agggatttattactccctctcaaccatcagccacaccctttggttctggagggccacctgacattagcggcctggatggt tacaggcaacacttgcttacagaggtcaaggcttccaaaaacgaaatctccatgatgcgggagtgggcaacagcgcatgg atcttctgtacggcaaagaagtgtgcgacaagaaactaccatggcgagggctggaactctgcaagactttttgttccaaa aggaaatcgaagttagagaaagaatcgacctttcttcaaacagtgtggcaaccaaatacatcagctcagaatccagcatc actgttgcagaagatgaagtaaccgagtacgattcaagcagtgatgaagtaatttatgagcctgaaggaagatcttgtgg aggaggtaagatcttcgaggaccaagtggaggagcctgcagaagattctgaggaccgcttgaacttgttcaaagaaggaa aatgtagggcgaaaacaagccttactcgagccagacgaaagctgttatcattaatcgatgatgatcatccgccaagacgt aacgatgtgcgaaatggatgtgaaaatcttgatttggtgttagagacggctttgcaaattatggagaacctttcagaaga atattcgcgtcgaggagatcggtataatcgaaagaaagtcggcagagaaatggaacagttagaaagcgaattcactgaag ctcagaacagagcgcaagcatatttggataaaacaaaaccggaatcatcgacttcggaatgtgtgttaagtgaggcagag agtgctcgctccaaggaaattgaattccagtcacgcccagtttctcgagacgatcaagacccacccgaggagaaacgcgc cttgctcaagccacacccagattcaagagagcttcgagattattataaatggctgtacagcgatttagttcaggaggatc tatcaccccgtcaatttactccagtaccgacggacttccctggtaaagcttcagctgaaacccccgcggtgaccattggt cgtgacatgtggactcaacttaaacgtgtcgctataccagtattttcgggaaataagaaaacatatgagagttggaaagc agcattcattgcctgtattgacaaagcacccgcgacgccagaatataaactccttcagttacgccagtatttatcgggag aggccctgaagactatcgaaaacttaggacattcgggatacgcttacgaggctgctaaagagagactagagcgtaagttt ggtggccaacggcgtcaaaatgccattagactagaggagttggagaatttcaagccccttcgacccgacaattcaaagga tttggaagactttgcggatcttttggacatagcagttactaaccttaaagacgttaattgtttgtgcgcaacccttctgc gcaggattttcgatggattaacagaggagactacatctcgttattatgaccgatttatcgaaattaaggcctcattaggc ctacagggagaataccaattaggcctacagggagaataccaattaggcctacagggagaataccaaagagtgtcagtgaa catactcaatggaaaagttgaggctttcgaaacaatgccagtagaacttgaggtggagattttagatagacagttaacta gaagaatcagtgctctcacaacagaccgagttaccggaaatttgcgcattatcgattggagaaaagaatcgaacaagtgg aaacatctacaaggaaaagcctttccaaaacagagtaccgcgcgtccgattgttgatattctgattggtatcgatcgtct tgacttacattactcctacgaagacgtccagggatttccaggagacccaattgcaagacgtacacctttaggttggactt gtatcggagatccggactgcaagatcgggaactgtgtacagacaaactttatccatgcgtatttcgttcatggagaggca aagttggaggaaattgatttaactctgcgccgattctgggaaatagaagctgtccacaaagacgaacctgttttgggggt tgaagacagaactatcttgaacaacacccaaaactccttaaaggtatatcagaaaagttccgaaaccgctctcaaatcga cctacatggatgacagtatggattcagtggctgatgaccagcaaggaatcgaactgcacaagcaattgtcacaactttgg aaacgtgcaggaatgcaagcgcgaaagtggttgtccaactctccagttgtgctgagtgaaattccaccggaagacagagc ttcagagattgatttaaaggaaggatccctaccctctatcaagacccttggaatattatggcaggcagcaaaggatgcgt tcactttcaaggttcaaccacctgacaactacttttcctttacaaaacggaactttctattaagagtggcaactttgttc gatccactcgggttcctcgcgccgtttattatcagagccaaagtcctgttacaagacctttgggctgcgggactagattg ggacgaccctttcggagaattgcccgaactagctcagatcagcgtcccacgatgcttgcaaccaatgaaagatgaactaa caatttcctcatccccgcaaaccttcgtggatgcttctgaagatgcttatggttccgtcgtatattacagaaatgtttat ccaagtggcctaatatccagcgttattgtggccgcaaaaacaagcgtcgctccccttagagcaattagtgttccacgcct ggaattgatggttgctgtgcttggtttaaggctaactaaagagatttcaaaggccttgaatgtatcggatgcagttttct ggtcagacagcgtaaatgtaccctggtggttgcgtaacgcgagtggacgtttcaagccattcgttgctaacagagttgct gaaattcaaagtttaaccagttctaatcagtggaagtatgtttcaacggaaagcaatcccgcggatcttgcaacaagagg tgtaacagcatctggtctagcttgttccgaaatatggtggcaaggccctaaattcttgaaaaaaaccggagtctgaatgg ccagagaatctgattgaatcgtcatcatcatcgcaaaaagaaatcagatcaagaggacgtttcagcaaagcagaaaccaa caaaagtcaagaaagcacactaactgcg |
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Protein
| Protein ID | aacu_s0062.g41.t1 |
|---|---|
| Definition | - |
>aacu_s0062.g41.t1 MLYVLCVEVLACKIRATNDIEAFLLPGAGGLQFKVCQYADDTTAFVKNEKSLFAPFEAISQFERGSGAKLNRSKTEALWL GAWKDRPDQPLGLSWNASGEGLVGREGVQLSCVSRHGMPERSPVVDRSAVDMEWEVINLTSPRFDYYNRCILEGLGGCVS GSSHQGTLDPGGILTAYKCPRTQGSSFCLESFLQESKETSCPSPNGQLNSSCIPTKNGGDTVSGTSRDGPGALGICSGEG NFPDGRILARPGMGPPIHRSLCGSHEYTTSELCELVPRPLCSGDRCLSDPLVESEGLLLPPFLTDLSLPGKDKEGSGNNG FDSINLACTGMVPSPVRDVLQTSDSTFPAEGFITPSQPSATPFGSGGPPDISGLDGYRQHLLTEVKASKNEISMMREWAT AHGSSVRQRSVRQETTMARAGTLQDFLFQKEIEVRERIDLSSNSVATKYISSESSITVAEDEVTEYDSSSDEVIYEPEGR SCGGGKIFEDQVEEPAEDSEDRLNLFKEGKCRAKTSLTRARRKLLSLIDDDHPPRRNDVRNGCENLDLVLETALQIMENL SEEYSRRGDRYNRKKVGREMEQLESEFTEAQNRAQAYLDKTKPESSTSECVLSEAESARSKEIEFQSRPVSRDDQDPPEE KRALLKPHPDSRELRDYYKWLYSDLVQEDLSPRQFTPVPTDFPGKASAETPAVTIGRDMWTQLKRVAIPVFSGNKKTYES WKAAFIACIDKAPATPEYKLLQLRQYLSGEALKTIENLGHSGYAYEAAKERLERKFGGQRRQNAIRLEELENFKPLRPDN SKDLEDFADLLDIAVTNLKDVNCLCATLLRRIFDGLTEETTSRYYDRFIEIKASLGLQGEYQLGLQGEYQLGLQGEYQRV SVNILNGKVEAFETMPVELEVEILDRQLTRRISALTTDRVTGNLRIIDWRKESNKWKHLQGKAFPKQSTARPIVDILIGI DRLDLHYSYEDVQGFPGDPIARRTPLGWTCIGDPDCKIGNCVQTNFIHAYFVHGEAKLEEIDLTLRRFWEIEAVHKDEPV LGVEDRTILNNTQNSLKVYQKSSETALKSTYMDDSMDSVADDQQGIELHKQLSQLWKRAGMQARKWLSNSPVVLSEIPPE DRASEIDLKEGSLPSIKTLGILWQAAKDAFTFKVQPPDNYFSFTKRNFLLRVATLFDPLGFLAPFIIRAKVLLQDLWAAG LDWDDPFGELPELAQISVPRCLQPMKDELTISSSPQTFVDASEDAYGSVVYYRNVYPSGLISSVIVAAKTSVAPLRAISV PRLELMVAVLGLRLTKEISKALNVSDAVFWSDSVNVPWWLRNASGRFKPFVANRVAEIQSLTSSNQWKYVSTESNPADLA TRGVTASGLACSEIWWQGPKFLKKTGV |
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