Gene
| Gene Model ID | aacu_s0062.g44 |
|---|---|
| Locus | sc0000062 : 1157640 ... 1169787 : + |
| To GenomeBrowser | sc0000062:1157640..1169787 |
| Genes list of scaffold | sc0000062 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| aacu_s0062.g44.t1 | 1 | 1 | Roc | 65 | 118 | 2.1e-07 | 31.1 | 2.1e-08 | 8.5e-05 | 22.6 |
| aacu_s0062.g44.t1 | 1 | 1 | COR | 352 | 550 | 1.1e-18 | 67.6 | 5.6e-22 | 2.3e-18 | 66.6 |
Results of InterPro Scan
| Gene Model ID | Analysis | Start | End | i_acc | i_desc | GO | Pathway |
|---|---|---|---|---|---|---|---|
| aacu_s0062.g44.t1 | PANTHER | 35 | 99 | ||||
| aacu_s0062.g44.t1 | SUPERFAMILY | 61 | 111 | IPR027417 | P-loop containing nucleosid... | ||
| aacu_s0062.g44.t1 | Gene3D | 61 | 259 | ||||
| aacu_s0062.g44.t1 | MobiDBLite | 141 | 218 | ||||
| aacu_s0062.g44.t1 | PANTHER | 236 | 254 | ||||
| aacu_s0062.g44.t1 | SUPERFAMILY | 245 | 282 | IPR027417 | P-loop containing nucleosid... | ||
| aacu_s0062.g44.t1 | PANTHER | 329 | 549 | ||||
| aacu_s0062.g44.t1 | Pfam | 352 | 550 | IPR032171 | C-terminal of Roc (COR) domain | KEGG: 04150+2.7.11.1|KEGG: 04151+2.7.11.1|KEGG: 04926+2.7.11.1|KEGG: 05165+2.7.11.1 |
Transcript
| Transcript ID | aacu_s0062.g44.t1 |
|---|---|
| Definition | - |
>aacu_s0062.g44.t1 cccataaaaactactgaatttatgaagaagaccttaggacatataacgcaaattggtctgctaagttaaagaccaataaa atgagaaaatcgtatgagtaaaatttatgatatttccttcattagcgttatcattaacaagaccgtcacaacctggtacg tacctggttcaacatcatttgttacaaatgaaaacagtgtcttcagcttttgcagacaaggagaaatagctgatatctac attattgatttttaaccaaaaaggggctacctaaaagaaattgttgtgcagtctaacaaaagatcatacttgtgttcact tgaaaaaagagcttgataatttaatgttatggaccgcatcaagaaaaagatgaagttccaggcgtggtctggactgcaaa gagaggaaccgggaaacaatgtggagatgcttgaaaaagagatagggactcctcctgaaattcatttacgtggtcctagg gccttggaggcttatttcaaggctcttgaagaaggagaaacccgcgtaagaagaattcctctcatgttgattgggcagga ccgttcagggaaaacgagcctcaagaagacgcttaagagaataccattcaacccacatgaagacagcactgttgggatag atgttgatccttcgttcttcaaagtaaccactgaagcttggaagataggggaggaggagagagccacaaacaaggaggca gaaagttattttgagtataatattgctcgtcaagtagtaaagaatctaaaacataatgaaaatctacccaagactgacac tgacgcaaaaagtgtaagtcaaacaaatgaggtcaccaaagatcctccgtctaaattttttagtcaagatgcgtcttcta tgcaatccctagttgtaccactttctaaaagagagaaagatgaaaatcttgcttctgaaaccactgacaattacaaatcg agcatagagcacacaacagaaagagatgaccttctttccccacaaacgtcactcgaagagattgagtccttgctgccaga cttacttgcagttgacgacacggaaaatgaagatgacatctatttggttttgtgggattttgctggtaaaggtcatgaag tacacccatcttcagcgtctacagttctccccgagacacttccacctgttttcctagtttgtactcatgctgatcaacct tttggtgggagagatcctagagatttggcccttgaagtgtatggtgaattgcaagggaagccttacagcacacacctgtc gggtaagtttgaagtcgacaatactaaatcaggcgacaaactggagagtcccgaagtgtcacgcttacgagagagcattc gagccgttgccagggagctaccgcagatgaaggaatttattcctctcaagtggttgaagtttgagaaaatgcttcaagtc tttctgaataaaggtcatatatggattaccattaagcacgcaaagcagatagcatctgatctctgccaaatccacgacga tgtagcattcaaaacagcaattgattttctccacgatcagagaattttgatacattttgataacactgatgaattgaaca aattagttgttttggatctccagtggttaatcgacattatgaagaaggtaattaccattaaacgctacgatgatgcagaa agagaattcaagttcctgaggtgtaagctacagaaagaaggaatcctggaagagaaactcctgcagcatgtgtgggagcc gttgattggacagtatgccacgtttgaaagcctcgtcgcaattatggagaagtttagcctgctgtgctcttggcatgcat cggacgatttatctagtaggaagtatttggtgccgtccaagttaaagtcgcatccaccacagcacataaacagattgatc gtttctgcacgcctctcgtctcttttcattaagtttgaatctggacaagtcccatcgcgcctgtttctacgactcgtgac tcagtttcttctatggggcaaggaaggattttggagcccagtgaaccctcagttgtatcagaattttgccagattattta ctgctaaggacgacaaaaggctctgttgttctcttttgtcattcttcgttcattgaagttgttgttcatgggggcaatga ttctcatgaagtgccttgtgcccaaccagttttcaggcagctccttttgatgcttgagtgtatgcgtaaggagttctttt ggttggagagtatgagatatcaagctggggtgatttgtacagtttgctgccatgaaagaaaagtagagttttgcc |
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Protein
| Protein ID | aacu_s0062.g44.t1 |
|---|---|
| Definition | - |
>aacu_s0062.g44.t1 MDRIKKKMKFQAWSGLQREEPGNNVEMLEKEIGTPPEIHLRGPRALEAYFKALEEGETRVRRIPLMLIGQDRSGKTSLKK TLKRIPFNPHEDSTVGIDVDPSFFKVTTEAWKIGEEERATNKEAESYFEYNIARQVVKNLKHNENLPKTDTDAKSVSQTN EVTKDPPSKFFSQDASSMQSLVVPLSKREKDENLASETTDNYKSSIEHTTERDDLLSPQTSLEEIESLLPDLLAVDDTEN EDDIYLVLWDFAGKGHEVHPSSASTVLPETLPPVFLVCTHADQPFGGRDPRDLALEVYGELQGKPYSTHLSGKFEVDNTK SGDKLESPEVSRLRESIRAVARELPQMKEFIPLKWLKFEKMLQVFLNKGHIWITIKHAKQIASDLCQIHDDVAFKTAIDF LHDQRILIHFDNTDELNKLVVLDLQWLIDIMKKVITIKRYDDAEREFKFLRCKLQKEGILEEKLLQHVWEPLIGQYATFE SLVAIMEKFSLLCSWHASDDLSSRKYLVPSKLKSHPPQHINRLIVSARLSSLFIKFESGQVPSRLFLRLVTQFLLWGKEG FWSPVNPQLYQNFARLFTAKDDKRLCCSLLSFFVH |
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