Gene
| Gene Model ID | aacu_s0062.g47 |
|---|---|
| Locus | sc0000062 : 1252178 ... 1253139 : - |
| To GenomeBrowser | sc0000062:1252178..1253139 |
| Genes list of scaffold | sc0000062 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| aacu_s0062.g47.t1 | 1 | 1 | DUF3504 | 52 | 114 | 1.2e-06 | 28.5 | 4.1e-10 | 2.2e-06 | 27.5 |
| aacu_s0062.g47.t1 | 1 | 1 | Phage_integrase | 98 | 163 | 3.0e-07 | 30.3 | 8.4e-11 | 4.6e-07 | 29.7 |
Results of InterPro Scan
| Gene Model ID | Analysis | Start | End | i_acc | i_desc | GO | Pathway |
|---|---|---|---|---|---|---|---|
| aacu_s0062.g47.t1 | Gene3D | 23 | 167 | IPR013762 | Integrase-like, catalytic d... | GO:0003677|GO:0006310|GO:00... | |
| aacu_s0062.g47.t1 | PANTHER | 30 | 235 | IPR026148 | Mitochondrial antiviral-sig... | GO:0004871|GO:0005739|GO:00... | Reactome: R-HSA-168928|Reactome: R-HSA-5689896|Reactome: R-HSA-918233|Reactome: R-HSA-933541|Reactome: R-HSA-933542|Reactome: R-HSA-933543|Reactome: R-HSA-936440 |
| aacu_s0062.g47.t1 | PANTHER | 30 | 235 | ||||
| aacu_s0062.g47.t1 | SUPERFAMILY | 56 | 164 | IPR011010 | DNA breaking-rejoining enzy... | GO:0003677 | |
| aacu_s0062.g47.t1 | Pfam | 98 | 163 | IPR002104 | Integrase, catalytic domain | GO:0003677|GO:0006310|GO:00... | |
| aacu_s0062.g47.t1 | MobiDBLite | 183 | 209 |
Transcript
| Transcript ID | aacu_s0062.g47.t1 |
|---|---|
| Definition | - |
>aacu_s0062.g47.t1 ttcacaaaaattctctgacgactgaaacggtgcaaaagttgttcgaggcaggtcaattagcgagtgcagaaacaaaaaat ccccgtcttttgctacaaacaacgtggttctacatttcactgtatttcggtaagcgaggtagggagaatcaaagcgcgat gaagaaatcgatgcttcgcctagccgtgacaccctcaggggaagaatattttgagctgaataaagacgaacctggagcag tgctttccaccaagaaccacaggggtggcctcgacggcacggaagatcacgcagacggcaaaatatttgcttcccctaat tcgtcaagatgcccacttcagaccattaaagcgtatctttgtcatcttcatcctgaagttgatgccttattccagcgtcc taaggatatctccctgaggttcgacccagaaaaagataagatctggtttgagaagaaggtcttgggccataacaccttgg aaaacatgatgcgaaatatgaccgagagagccggtatcttgccgtactacactaaccattctctgagagcgacaaccgtt acagttctgtcttcaaacaatgtagaaacacgacaaattaaagcagtaactggccacaaaagtgacacaagcatcgaaag ttattgtgaaaggcccaccttgcatcaattcaagagcatgtcctcggcgctaacttcattcattcacggcagtgaaaaca cgccaccagcgtccacttcatccaatccaaccacaagtacagcaaatcagtcaggaaattcagccaaaaaaatcttcaca atgccaaccaacagcgtgtccgttagtcaaaacgaagaaaactttctcttgcctaacggagttaatccacaagccatcat gccatcagggaatttccaaggatgctcattcactttcaacatcaacatgaacaagtgaatggattaaactctctttgtta ac |
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Protein
| Protein ID | aacu_s0062.g47.t1 |
|---|---|
| Definition | - |
>aacu_s0062.g47.t1 MKKSMLRLAVTPSGEEYFELNKDEPGAVLSTKNHRGGLDGTEDHADGKIFASPNSSRCPLQTIKAYLCHLHPEVDALFQR PKDISLRFDPEKDKIWFEKKVLGHNTLENMMRNMTERAGILPYYTNHSLRATTVTVLSSNNVETRQIKAVTGHKSDTSIE SYCERPTLHQFKSMSSALTSFIHGSENTPPASTSSNPTTSTANQSGNSAKKIFTMPTNSVSVSQNEENFLLPNGVNPQAI MPSGNFQGCSFTFNINMNK |
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