Gene
| Gene Model ID | aacu_s0062.g59 |
|---|---|
| Locus | sc0000062 : 1526205 ... 1537856 : - |
| To GenomeBrowser | sc0000062:1526205..1537856 |
| Genes list of scaffold | sc0000062 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| aacu_s0062.g59.t1 | 1 | 1 | HHH_8 | 12 | 77 | 1.5e-20 | 73.2 | 4.5e-21 | 6.2e-18 | 64.8 |
| aacu_s0062.g59.t1 | 1 | 1 | DNA_pol_lambd_f | 98 | 147 | 1.9e-16 | 59.5 | 3.2e-19 | 4.3e-16 | 58.4 |
| aacu_s0062.g59.t1 | 1 | 1 | HHH_5 | 98 | 127 | 2.2e-07 | 31.3 | 2.2e-08 | 3.0e-05 | 24.4 |
| aacu_s0062.g59.t1 | 1 | 1 | DNA_pol_B_palm | 149 | 260 | 4.5e-35 | 120.1 | 7.1e-38 | 9.7e-35 | 119.0 |
| aacu_s0062.g59.t1 | 1 | 1 | DNA_pol_B_thumb | 268 | 333 | 3.6e-20 | 71.6 | 5.0e-23 | 6.8e-20 | 70.8 |
Results of InterPro Scan
| Gene Model ID | Analysis | Start | End | i_acc | i_desc | GO | Pathway |
|---|---|---|---|---|---|---|---|
| aacu_s0062.g59.t1 | Gene3D | 1 | 83 | IPR027421 | DNA polymerase lambda lyase... | ||
| aacu_s0062.g59.t1 | PANTHER | 4 | 334 | ||||
| aacu_s0062.g59.t1 | PANTHER | 4 | 334 | ||||
| aacu_s0062.g59.t1 | SUPERFAMILY | 4 | 89 | IPR027421 | DNA polymerase lambda lyase... | ||
| aacu_s0062.g59.t1 | SMART | 10 | 333 | IPR002054 | DNA-directed DNA polymerase X | GO:0003677|GO:0003887 | |
| aacu_s0062.g59.t1 | Pfam | 12 | 77 | IPR010996 | DNA polymerase beta-like, N... | ||
| aacu_s0062.g59.t1 | CDD | 14 | 332 | IPR002054 | DNA-directed DNA polymerase X | GO:0003677|GO:0003887 | |
| aacu_s0062.g59.t1 | Coils | 22 | 42 | ||||
| aacu_s0062.g59.t1 | SMART | 57 | 76 | IPR003583 | Helix-hairpin-helix DNA-bin... | GO:0003677|GO:0006281 | |
| aacu_s0062.g59.t1 | PRINTS | 64 | 81 | IPR002008 | DNA polymerase family X, be... | GO:0003677|GO:0006281 | KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 |
| aacu_s0062.g59.t1 | Gene3D | 84 | 106 | ||||
| aacu_s0062.g59.t1 | SUPERFAMILY | 93 | 147 | ||||
| aacu_s0062.g59.t1 | SMART | 98 | 117 | IPR003583 | Helix-hairpin-helix DNA-bin... | GO:0003677|GO:0006281 | |
| aacu_s0062.g59.t1 | Pfam | 98 | 147 | IPR018944 | DNA polymerase lambda, fing... | GO:0003677|GO:0005634|GO:00... | |
| aacu_s0062.g59.t1 | PRINTS | 105 | 122 | IPR022312 | DNA polymerase family X | GO:0003677|GO:0034061 | |
| aacu_s0062.g59.t1 | Gene3D | 107 | 147 | ||||
| aacu_s0062.g59.t1 | PRINTS | 137 | 151 | IPR002008 | DNA polymerase family X, be... | GO:0003677|GO:0006281 | KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 |
| aacu_s0062.g59.t1 | Gene3D | 149 | 268 | ||||
| aacu_s0062.g59.t1 | SUPERFAMILY | 149 | 333 | ||||
| aacu_s0062.g59.t1 | Pfam | 149 | 260 | IPR028207 | DNA polymerase beta, palm d... | ||
| aacu_s0062.g59.t1 | PRINTS | 176 | 190 | IPR022312 | DNA polymerase family X | GO:0003677|GO:0034061 | |
| aacu_s0062.g59.t1 | PRINTS | 177 | 196 | IPR002008 | DNA polymerase family X, be... | GO:0003677|GO:0006281 | KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 |
| aacu_s0062.g59.t1 | PRINTS | 190 | 198 | IPR022312 | DNA polymerase family X | GO:0003677|GO:0034061 | |
| aacu_s0062.g59.t1 | PRINTS | 252 | 260 | IPR002008 | DNA polymerase family X, be... | GO:0003677|GO:0006281 | KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 |
| aacu_s0062.g59.t1 | PRINTS | 253 | 262 | IPR022312 | DNA polymerase family X | GO:0003677|GO:0034061 | |
| aacu_s0062.g59.t1 | PRINTS | 267 | 274 | IPR002008 | DNA polymerase family X, be... | GO:0003677|GO:0006281 | KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 |
| aacu_s0062.g59.t1 | Pfam | 268 | 333 | IPR029398 | DNA polymerase beta, thumb ... | ||
| aacu_s0062.g59.t1 | PRINTS | 269 | 282 | IPR022312 | DNA polymerase family X | GO:0003677|GO:0034061 | |
| aacu_s0062.g59.t1 | Gene3D | 269 | 332 | IPR037160 | DNA polymerase, thumb domai... | ||
| aacu_s0062.g59.t1 | PRINTS | 314 | 332 | IPR022312 | DNA polymerase family X | GO:0003677|GO:0034061 | |
| aacu_s0062.g59.t1 | PRINTS | 315 | 332 | IPR002008 | DNA polymerase family X, be... | GO:0003677|GO:0006281 | KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 |
Transcript
| Transcript ID | aacu_s0062.g59.t1 |
|---|---|
| Definition | - |
>aacu_s0062.g59.t1 gtgacgttatgcctcgtcgggaaaatatagtaactgcattattaaagctcttgaaaagggtcaaagtccgttcagattaa atatgtaacagaattttgctatattttttcaaagttatggaacgtgttggtcaaatgcgcaaaaaaaaaaaggaaatatt ttcagagcagctttgtctcgacttcggataaaagatacggagttcgaacccagtccaagcgcgctttctaaaccaatatg gcgacatctttagttgcttgttttcagctagcagccctaattatagaatagctttctcttcaggaatgagtaaacgaaaa gcccctgatcagaatccaaacagcgaattttgtgattttcttatcgagcttgcggaatacgagaagaatgtagcaagaca aattcataaatacaacgcatacagaaaagcagcttccgtgctagcaaagcatccctcaaaaatcaaaagtggagccgatg ctcggaaattgccggggattggagacaaaattggcaaaaagattgatgagtttatcaagacagggaagttggagaagttg gaaaagataaggaaggatgactcaagtttggccattcaacagttaacacgagtttctggaattgggccagctgctgcaag aaagctagttgatgatggcataacgacagtggatgggcttaaaaaggtccaagacaagctcaatcatcaccagaaaattg gactcaaatatgtggaagaatttgaaaagcgcattccacgagaagagatgcttatgcttcaggaaattattacacagatg gtcgcagattttgacaaagaagtaattgcaacggtttgcggtagttttaggagagggtctgcatccagtggagacataga tgtattgatgactcatgcctcattcttttcctacaatgatgactttgacaagaaagctcttcttcatggtgctgtcaaga aaatgacaaaagaggggtttgtcacagatacaatttccctgggtgacacaaaatttatgggagtatgtgtgctgccaaaa acagatgaaaaactacacagaagaatagacattagattgattcccaatgatcaatattattgcgggattctgtacttcac tggtagtgatgaatttaacagaagaatgcgacaggaagcgctggagaaaggcttcaccattaatgaatactctatccggc ctttggggagtactggtgtgccaggagagcccattccggtgacaagcgaagaggaaatatttgaattgattgacatggat tacaagcaacctcatgagagaaatctctgaactcattgttggaaccgagttcaaatcacggacaaaatcgggaccagcga tagtttgccagttggcgagataaacgtgctgatcaaggcatgaaatgtctccaagaacaatccagcttgcgaacgcaaag tcgaggttgttgggtgtttcattcagaatcgttggggaatgtcatacgcatgtaagcgtcacgaggtgttccttcaacta atttttaacttctctgggcgagacatgccgacggtaaagttgttcggaagaactccagggaccagatataacctgaaacg ctagtatcgcccccagttctgcagttcatgtatcgccatgggttaatggtgatattgtatagtaccagcattggctaatt tcaattcatcactggggatataagcgtaaacgctgcaatcggcgccagttctacactagtcatgcatcgccgtaggccaa tggtggcatttcgtcgtaccatcgttggctcatggcgatgcatcgttgaatgcaaacaaaaacgttagtgttggcactag ttgtgcatcaatcgtgtaccggcattggtcaatggtgcgcgatgagatttgtgccaaagatgtgcctaaattacgaatga tatggtaccaacgacagcgccacattgtgacaaacatttgcatcatgattggccagaagtgttttcgtattctataacac ggctcttcgaaattcaaacattgcagtctctcaaatctatttgattcctcagaagtaaaattgatcttactgttctggtt tcatgtcgttccttctatgccttccagggggattaaatttcgcctattgacgattgtgcgtttcgcgggaagaaattttc ccgaatttggatttcagattttactgttgagaagaaattttcgcgaatcttaggcaattttctgtctggtatttcacgtt tggcactgctacacacaaaagtagtgacaaggggtttcgtattttctttacattttgtttgtgttctctgagtaataaaa gcctcaagtcggccattacaactcaaagctgcacagcatacggtaatacaaagaaatggattaaatttttgcggattttt tttttttctggcggaagataattttcgctgtatttaattttcgcgaatcgacggataattcgcgaaaataaaactcccgc aaaaacttcatgcaaatggtattatgttttgtgattatatatgaagcatctgccgaggcaaatctcaagtcccaaatgct gcaagaagtgagaagatatttgcctcgtagctagtgtatattgattctacattaatacgagtcaggcgcagacgaaaaag cggaaatgaaaagacttcgttttttccgtgctccgatccacaatgtacttgtcttgtgttatccgcgaatcgatcacaag ggacaaatcctgaaatactgttatgaacatttgagtgtgaatatttaaacacaaagataaaaaaaaaattttaaaaaa |
|
Protein
| Protein ID | aacu_s0062.g59.t1 |
|---|---|
| Definition | - |
>aacu_s0062.g59.t1 MSKRKAPDQNPNSEFCDFLIELAEYEKNVARQIHKYNAYRKAASVLAKHPSKIKSGADARKLPGIGDKIGKKIDEFIKTG KLEKLEKIRKDDSSLAIQQLTRVSGIGPAAARKLVDDGITTVDGLKKVQDKLNHHQKIGLKYVEEFEKRIPREEMLMLQE IITQMVADFDKEVIATVCGSFRRGSASSGDIDVLMTHASFFSYNDDFDKKALLHGAVKKMTKEGFVTDTISLGDTKFMGV CVLPKTDEKLHRRIDIRLIPNDQYYCGILYFTGSDEFNRRMRQEALEKGFTINEYSIRPLGSTGVPGEPIPVTSEEEIFE LIDMDYKQPHERNL |
|