Gene
| Gene Model ID | aacu_s0062.g60 |
|---|---|
| Locus | sc0000062 : 1538317 ... 1566772 : + |
| To GenomeBrowser | sc0000062:1538317..1566772 |
| Genes list of scaffold | sc0000062 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| aacu_s0062.g60.t1 | 1 | 1 | 2-oxogl_dehyd_N | 14 | 52 | 2.5e-19 | 68.4 | 7.7e-23 | 2.5e-19 | 68.4 |
| aacu_s0062.g60.t1 | 1 | 1 | E1_dh | 220 | 539 | 0.0 | 265.0 | 0.0 | 0.0 | 264.5 |
| aacu_s0062.g60.t1 | 1 | 1 | Transket_pyr | 613 | 825 | 0.0 | 218.5 | 0.0 | 0.0 | 217.7 |
| aacu_s0062.g60.t1 | 1 | 1 | OxoGdeHyase_C | 830 | 975 | 0.0 | 181.2 | 0.0 | 0.0 | 180.2 |
Results of InterPro Scan
| Gene Model ID | Analysis | Start | End | i_acc | i_desc | GO | Pathway |
|---|---|---|---|---|---|---|---|
| aacu_s0062.g60.t1 | PIRSF | 1 | 976 | IPR011603 | 2-oxoglutarate dehydrogenas... | GO:0004591|GO:0006099|GO:00... | KEGG: 00020+1.2.4.2|KEGG: 00310+1.2.4.2|KEGG: 00380+1.2.4.2|MetaCyc: PWY-5084 |
| aacu_s0062.g60.t1 | PANTHER | 6 | 974 | ||||
| aacu_s0062.g60.t1 | PANTHER | 6 | 974 | IPR011603 | 2-oxoglutarate dehydrogenas... | GO:0004591|GO:0006099|GO:00... | KEGG: 00020+1.2.4.2|KEGG: 00310+1.2.4.2|KEGG: 00380+1.2.4.2|MetaCyc: PWY-5084 |
| aacu_s0062.g60.t1 | Pfam | 14 | 52 | IPR032106 | 2-oxoglutarate dehydrogenas... | KEGG: 00020+1.2.4.2|KEGG: 00310+1.2.4.2|KEGG: 00380+1.2.4.2|MetaCyc: PWY-5084 | |
| aacu_s0062.g60.t1 | TIGRFAM | 15 | 974 | IPR011603 | 2-oxoglutarate dehydrogenas... | GO:0004591|GO:0006099|GO:00... | KEGG: 00020+1.2.4.2|KEGG: 00310+1.2.4.2|KEGG: 00380+1.2.4.2|MetaCyc: PWY-5084 |
| aacu_s0062.g60.t1 | Gene3D | 87 | 178 | ||||
| aacu_s0062.g60.t1 | SUPERFAMILY | 132 | 557 | IPR029061 | Thiamin diphosphate-binding... | ||
| aacu_s0062.g60.t1 | Gene3D | 179 | 539 | ||||
| aacu_s0062.g60.t1 | Pfam | 220 | 539 | IPR001017 | Dehydrogenase, E1 component | GO:0008152|GO:0016624 | Reactome: R-HSA-389661 |
| aacu_s0062.g60.t1 | CDD | 226 | 489 | ||||
| aacu_s0062.g60.t1 | Gene3D | 609 | 839 | ||||
| aacu_s0062.g60.t1 | SUPERFAMILY | 609 | 832 | IPR029061 | Thiamin diphosphate-binding... | ||
| aacu_s0062.g60.t1 | Pfam | 613 | 825 | IPR005475 | Transketolase-like, pyrimid... | ||
| aacu_s0062.g60.t1 | SMART | 613 | 826 | IPR005475 | Transketolase-like, pyrimid... | ||
| aacu_s0062.g60.t1 | Pfam | 830 | 975 | IPR031717 | Multifunctional 2-oxoglutar... | KEGG: 00020+1.2.4.2|KEGG: 00310+1.2.4.2|KEGG: 00380+1.2.4.2|MetaCyc: PWY-5084 | |
| aacu_s0062.g60.t1 | MobiDBLite | 946 | 976 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| aacu_s0062.g60.t1 | sp|Q148N0|ODO1_BOVIN | 2-oxoglutarate dehydrogenase, mitochondrial | 0.0 |
| aacu_s0062.g60.t1 | sp|Q02218|ODO1_HUMAN | 2-oxoglutarate dehydrogenase, mitochondrial | 0.0 |
| aacu_s0062.g60.t1 | sp|Q5RCB8|ODO1_PONAB | 2-oxoglutarate dehydrogenase, mitochondrial | 0.0 |
| aacu_s0062.g60.t1 | sp|Q60HE2|ODO1_MACFA | 2-oxoglutarate dehydrogenase, mitochondrial | 0.0 |
| aacu_s0062.g60.t1 | sp|Q5XI78|ODO1_RAT | 2-oxoglutarate dehydrogenase, mitochondrial | 0.0 |
Transcript
| Transcript ID | aacu_s0062.g60.t1 |
|---|---|
| Definition | - |
>aacu_s0062.g60.t1 cacgatatttgaaaggcaatttgttgggttgtggcggaaaggtttcgtttatgcgatggaaccaaacggcagctttagtc gctcaggaaccatttttaagcggaagcaacagtaactatgtggaggaaatgtatttatcgtggaaagaagaccctaaaag tgttcataggtcttgggatgcttattttcggcaagtgcagaatggcatgccgcctggccaagcctatcagcctccaccaa tcctgggacagcaagctggaatggtcgcaacaagacaaactgttcccagtgcaacagaccaatcaacgatcaacagtttg gtgtctgatcatttggctgtctattcattgatacgctgttaccagattcgaggccaccacattgctcagttggaccctct tggtatccttcaagcagatttgtctgacaccaaacctgaagatctgtttttagaatattggggactaggagagtcagatc ttgataaagtctttcagcttccagacaccacttttatcggtggtaatagccaagttctcactttgagagaaattatcgaa aggttggagactgcatactgtggacacattggtttggactacatgtttatccccgaaagatcaaaatgtgactggataag gaagagatttgaaactccaggaatcataacattggacacagaggaaaagaaaactgtgcttaagagactcattcgatcaa cagggtttgaagcctttctggccaagaaatggagctcggagaagcgttttggaatcgagggctgcgaagttttgatccca gcaatgaaaatgattattgataagtccagtgaacttggtgttgaaagcatcatcatgggaatgccgcacagaggaaggct taatgtcctggctaatgtttgccgcaaatctttagaacagctttttactcaatttgactcttcattggaggcttctgatg aaggatcaggagatgtgaagtaccatcttggaatgtcacatgaacgactaaacagagcgactaacaaactcattcgcttg gccgttgttgcaaatccctcacatttggaagctgttgatccagtagttgaaggcaaaacaagatccgagcagttctacag gggcgacacacaaggcaaaaaggtgatgagtgttctcatccatggcgatgcagcattttctggacagggtgtggtgtatg agacatttcatctgagtgctctgccacagtacaccacccatggcaccattcatattgtcgtgaacaaccagattggtttc accacggatccgagagtcgcccgctcatctccttattgcactgatgttgccaaggttgtcgatgcccctattttccatgt gaacgctgataatcctgaggcagtcatgcatgtctgcaaagtcgcagctgagtggagggcagagtttggcaaagatgttg ttattgatttggtttgttatcgtcgtcatggtcacaatgaaggcgataatcccatgttcacacaaccaataatgtacaag aacatcaccaaaaagaattccgtgatggagttgtatgcgaaaaagcttcaggatgaaggcgtggtgtccgaagaatgggt gcaggaggagaagtcaagttatgacaagatttgtgaagaagctttgcgggaagcaaagagtgaaaagagagtgttgctga acagagattggctggactcaccttggaaaggttttttcaagaaaggccactctccaactcaaccaatcagaccaactggt gtgactttagacacaatcaaacacattggaaatgtcatgagcgcttctcctggaggagacttcaaaattcacggaggtct tcgcagagttttgaaagcaaggcatgacctgttggaaaagggctacattgactgggcgatgggcgaggcattggcgtttg gttcgcttctgatggagggagtacatgtgagattaagtggtcaggatgtggagagaggaacattcagccatcgacatcat gtccttcatcatcaagataaagacaaagtgacttacagtccgctcaatgacttgagtccagatcaagcaatctacaccgt gtgcaacagctctctgtctgaatttgcagtgttaggttttgagttgggttttagcatgactaatccttttgcgctcgttt gctgggaagctcagtttggggacttcaacaacaacgctcagtgtatcattgaccagtttattagtagtggacaagacaaa tgggtcagacagagcggattggtaatgatgttacctcatggatacgaaggcatgggacctgaacactctagtgccagacc ggaaagatttttgcaaatgagtaatgacaatccggatgtgttcccaagtattgacgagttgtttgaagtgaatcagctgt atgccgccaactggcaggttgttaattgcagtacaccggccaacattttccaccttttccgtcgtcaaattgcgctgaac tttcgtaaaccccttattctcctcacgccgaaaagtcttcttcgcctggaagcggccaggtcgcatgtcgatgaaatgac agaaggaacttccttccaacgagtgattcccgactcgggcccagtctccaaaaatcccgagaaagttcggaagctgcttt tctgtactggcaaagtttactatgaacttgtaaaggagcgtaataaaagaggtctagaggaagacatcgccgttacacga gtagagcagattagccctttcccctttgacttggtgagagccgaacaccagaagtacgacaatgcacaggtcgtctgggc gcaagaagagccaatgaacatgggatactggacttacgtcagcccacgacttcttaacgcagtgggacccaagccaaaga tcagttatgctggtcgccctcctgctgcctcaactgctacaggaaacaaacagaaccacatttctgaacaggaggacctc atcaataaagctttggaataaactggatcatttcacgatttagcaagttttagcgagatggcagtcctctgaaccaagga gtattcgtactgtgctttattttggaactttaccttggtcaacaaagcttataatcgcttcttgtgtattttttaacctc ttttatgcaacagatttcgctctgatatggatgaagtgctcactaaatggatctccgggataaggaaaaaactattttta gactgattgacaattagacaataggagattgcctttcccgaatgaaatgacagctggatttttttttctctcatggtctg cagcgacttcaattccacagcacgtgacattattatttttttttgtcttagaaacttatacttgaaatgcacgtaataaa tggtgaaacgaaat |
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Protein
| Protein ID | aacu_s0062.g60.t1 |
|---|---|
| Definition | - |
>aacu_s0062.g60.t1 MRWNQTAALVAQEPFLSGSNSNYVEEMYLSWKEDPKSVHRSWDAYFRQVQNGMPPGQAYQPPPILGQQAGMVATRQTVPS ATDQSTINSLVSDHLAVYSLIRCYQIRGHHIAQLDPLGILQADLSDTKPEDLFLEYWGLGESDLDKVFQLPDTTFIGGNS QVLTLREIIERLETAYCGHIGLDYMFIPERSKCDWIRKRFETPGIITLDTEEKKTVLKRLIRSTGFEAFLAKKWSSEKRF GIEGCEVLIPAMKMIIDKSSELGVESIIMGMPHRGRLNVLANVCRKSLEQLFTQFDSSLEASDEGSGDVKYHLGMSHERL NRATNKLIRLAVVANPSHLEAVDPVVEGKTRSEQFYRGDTQGKKVMSVLIHGDAAFSGQGVVYETFHLSALPQYTTHGTI HIVVNNQIGFTTDPRVARSSPYCTDVAKVVDAPIFHVNADNPEAVMHVCKVAAEWRAEFGKDVVIDLVCYRRHGHNEGDN PMFTQPIMYKNITKKNSVMELYAKKLQDEGVVSEEWVQEEKSSYDKICEEALREAKSEKRVLLNRDWLDSPWKGFFKKGH SPTQPIRPTGVTLDTIKHIGNVMSASPGGDFKIHGGLRRVLKARHDLLEKGYIDWAMGEALAFGSLLMEGVHVRLSGQDV ERGTFSHRHHVLHHQDKDKVTYSPLNDLSPDQAIYTVCNSSLSEFAVLGFELGFSMTNPFALVCWEAQFGDFNNNAQCII DQFISSGQDKWVRQSGLVMMLPHGYEGMGPEHSSARPERFLQMSNDNPDVFPSIDELFEVNQLYAANWQVVNCSTPANIF HLFRRQIALNFRKPLILLTPKSLLRLEAARSHVDEMTEGTSFQRVIPDSGPVSKNPEKVRKLLFCTGKVYYELVKERNKR GLEEDIAVTRVEQISPFPFDLVRAEHQKYDNAQVVWAQEEPMNMGYWTYVSPRLLNAVGPKPKISYAGRPPAASTATGNK QNHISEQEDLINKALE |
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