Gene
| Gene Model ID | aacu_s0062.g8 |
|---|---|
| Locus | sc0000062 : 275636 ... 284807 : + |
| To GenomeBrowser | sc0000062:275636..284807 |
| Genes list of scaffold | sc0000062 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| aacu_s0062.g8.t1 | 2 | 1 | Ig_3 | 125 | 187 | 4.8e-22 | 78.2 | 9.7e-12 | 1.2e-08 | 35.3 |
| aacu_s0062.g8.t1 | 2 | 1 | I-set | 127 | 202 | 2.9e-22 | 78.4 | 6.6e-13 | 8.3e-10 | 38.5 |
| aacu_s0062.g8.t1 | 2 | 1 | Ig_2 | 127 | 196 | 2.7e-14 | 53.0 | 1.3e-07 | 0.00017 | 21.7 |
| aacu_s0062.g8.t1 | 2 | 1 | ig | 128 | 198 | 2.2e-20 | 72.5 | 1.4e-10 | 1.8e-07 | 31.1 |
| aacu_s0062.g8.t1 | 2 | 2 | I-set | 223 | 300 | 2.9e-22 | 78.4 | 1.3e-12 | 1.7e-09 | 37.5 |
| aacu_s0062.g8.t1 | 2 | 2 | Ig_3 | 223 | 295 | 4.8e-22 | 78.2 | 2.4e-13 | 3.1e-10 | 40.4 |
| aacu_s0062.g8.t1 | 2 | 2 | Ig_2 | 227 | 306 | 2.7e-14 | 53.0 | 7.6e-10 | 9.6e-07 | 28.9 |
| aacu_s0062.g8.t1 | 2 | 2 | ig | 228 | 299 | 2.2e-20 | 72.5 | 4.7e-13 | 5.8e-10 | 39.1 |
| aacu_s0062.g8.t1 | 1 | 1 | TIR | 410 | 503 | 4.5e-17 | 62.3 | 7.0e-20 | 8.7e-17 | 61.3 |
| aacu_s0062.g8.t1 | 1 | 1 | TIR_2 | 412 | 516 | 2.6e-20 | 72.5 | 3.7e-23 | 4.6e-20 | 71.7 |
Results of InterPro Scan
| Gene Model ID | Analysis | Start | End | i_acc | i_desc | GO | Pathway |
|---|---|---|---|---|---|---|---|
| aacu_s0062.g8.t1 | Gene3D | 66 | 204 | IPR013783 | Immunoglobulin-like fold | ||
| aacu_s0062.g8.t1 | MobiDBLite | 87 | 115 | ||||
| aacu_s0062.g8.t1 | ProSiteProfiles | 113 | 201 | IPR007110 | Immunoglobulin-like domain | ||
| aacu_s0062.g8.t1 | SMART | 121 | 203 | IPR003599 | Immunoglobulin subtype | ||
| aacu_s0062.g8.t1 | SUPERFAMILY | 125 | 205 | IPR036179 | Immunoglobulin-like domain ... | ||
| aacu_s0062.g8.t1 | SMART | 127 | 192 | IPR003598 | Immunoglobulin subtype 2 | ||
| aacu_s0062.g8.t1 | Pfam | 127 | 202 | IPR013098 | Immunoglobulin I-set | ||
| aacu_s0062.g8.t1 | CDD | 132 | 197 | ||||
| aacu_s0062.g8.t1 | PANTHER | 135 | 532 | IPR015621 | Interleukin-1 receptor family | ||
| aacu_s0062.g8.t1 | ProSiteProfiles | 209 | 295 | IPR007110 | Immunoglobulin-like domain | ||
| aacu_s0062.g8.t1 | Gene3D | 218 | 282 | IPR013783 | Immunoglobulin-like fold | ||
| aacu_s0062.g8.t1 | SMART | 222 | 311 | IPR003599 | Immunoglobulin subtype | ||
| aacu_s0062.g8.t1 | Pfam | 223 | 295 | ||||
| aacu_s0062.g8.t1 | SUPERFAMILY | 225 | 312 | IPR036179 | Immunoglobulin-like domain ... | ||
| aacu_s0062.g8.t1 | SMART | 228 | 300 | IPR003598 | Immunoglobulin subtype 2 | ||
| aacu_s0062.g8.t1 | CDD | 233 | 295 | ||||
| aacu_s0062.g8.t1 | Gene3D | 283 | 330 | IPR013783 | Immunoglobulin-like fold | ||
| aacu_s0062.g8.t1 | SUPERFAMILY | 403 | 535 | IPR035897 | Toll/interleukin-1 receptor... | ||
| aacu_s0062.g8.t1 | ProSiteProfiles | 408 | 500 | IPR000157 | Toll/interleukin-1 receptor... | GO:0005515|GO:0007165 | |
| aacu_s0062.g8.t1 | SMART | 409 | 537 | IPR000157 | Toll/interleukin-1 receptor... | GO:0005515|GO:0007165 | |
| aacu_s0062.g8.t1 | Gene3D | 409 | 537 | IPR035897 | Toll/interleukin-1 receptor... | ||
| aacu_s0062.g8.t1 | Pfam | 412 | 516 | IPR000157 | Toll/interleukin-1 receptor... | GO:0005515|GO:0007165 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| aacu_s0062.g8.t1 | sp|Q9DD78|TLR21_CHICK | Toll-like receptor 2 type-1 | 2.0e-15 |
| aacu_s0062.g8.t1 | sp|Q9DGB6|TLR22_CHICK | Toll-like receptor 2 type-2 | 2.0e-15 |
| aacu_s0062.g8.t1 | sp|Q2V897|TLR2_BOSTR | Toll-like receptor 2 | 1.0e-14 |
Transcript
| Transcript ID | aacu_s0062.g8.t1 |
|---|---|
| Definition | - |
>aacu_s0062.g8.t1 tttgattcaatacactaaacctgtgttcaactctgcgttaaaagcttcgtccaggtggcaagtccttcatcatcgcgatc gaagaactcgagcgtgttgtgaaacaaggtcaacggataatttattgagagctggtttttccgaaagactgcccttatgc tttctaaactatcttgggttttctacactactctgattttaatcacgttacttcggaaaaactttattgttgactcgaaa catgtgggattgcaatcaaaatgtaatgttcaggcgatttcatgctcttgcaaagagaattacggcttggaagagtacgt gactgtggaattatgcctgaatcacaccaagtctccctgtcaggtcaaagcagtgatggatcagtgtaggaaaaaagcct tttcaagccatgcaagacagaaacgcaatatgcaagactcaaaatgccaaaatggaactttaacaaatggtgtttctaaa tccccatctgagcctattcttatggctggaacaaatggccctacaaagattcgtcgtgaagggaatgatgccatatttca ttgtatagttcattcgtctctcccagcaaacataacatggttttataatggcaagccactgatgaacgacagtctgcatc gatactttgaatgcaacacagttctccaccttcgatttgtgtcatccaaagatgcagggaattatagctgtgttgtcaac agtgcacttggaaaaacaacagcttcctctcgactgtctgttattccgagacacaaagacccaataatactttccatggg gctggatgatgacaagaattctaacactgcaataattattgttggaagcaatgtgaatttaacatgtaaaattcgcaatc ctcaaatacagaatacatttgaaaaaaatggaagggacttagacgaggacaaagactacacttaccataactttggagac gatgaaggcgaaattaaacgctctgttctagaaataaagaatgttactttggaagacgagggaaactacacgtgcgttgc gtttcgggaaggtgcaactacaagacgttatttttacctcaaagttgaggcgacggttccccctgatgactcttccacaa agaccttagcacttgtatttggtggtatcggtgtgctgattcttgtgggcttagcatttattagccttcgtaacagaacg caacggttgtcacgctaccttacgcaagggagccgaaacaacaaccaggaggctagggttccattgtcacaaacagaatt atctgtcacgcagattgagccgaacggggagtgcgtaagcgaagcaccccacaatcatgaaaatgtagagaaaagacctc ctgagaaagattacgatgctaggtacgacgtcttcatttgctacagctacaaagatattgggtgggtcaaagaactcgta gcagagctagagaagctacattttgtctgttgcatcgacttcagagattttgttccgggtgctgctatcgttgaaaacat ctcagaagcaatttattacagtgcgaaaaccatcgctgtactgtcaccgaattttttgaacagcgagtggtgcaaccgtg agctccagcaagcactgaccaggacacgcaagcatcaagttgtaccgattgtttacaggagctgtgcgattcctttgact ttacaagacaagacatatcttgactgggaaaattgccttgtcaaaccgtttttctgggaacaacttgaaaaagcgctgaa gcgaccatgcgatggatggattgatcagtaagcaactaccagcgttgccgatgtttattgatcctcaactgttctttgaa ggacagcatcgctttcacgttgtgtgtttttgcaacggatagctcgttttttcttctacagatgccgcaatttttgccat cagcgccgagaataaagatctccatggttccaaaccaggaagctcccgaaggatggacttaaccttcgcctatgttttct tacgcaatggagtgatttatacttcatagacggttttctatcaacaaatctcgattgcaatgggtcagacaggtagtgag aaaaaattaagaatgttgtcaaattagtcctcgagtcgattcctgcgaggtgaacattgatcttgcggccgatggcagag actttgccatgaaagtgggacaggacataaggtagcgtttgtgaggtccccatgaggtagagcctgtgctttgagatctt ttgatcggaaaaaccaaaagaaaaaaaacgatttgaagaaaaccttatttgaaacaaaaacttattgctttgataattat ttcgttatgagccttttgttttcatattattcaatgtcagcgaagtgttttatgtttgtttggcaaaaacggttttcaag tgacgagagaatgagagattccttcgtcgtagttttccagaaacgacacaagtgtaattaagagcgtgtcaaaccttaag ctggattattttttcttttaaccagtcatattattgacttgtgatgtcgccgacgtcggaaagaagggtgctcgaaattg tttggactcagtaacagcatttcattgactatcctaggcgaacaggaaagatccagttcttctcgcggcaggaaaagtgt ggtaaagtcgcactgaacgtttgaacaattctgggcacattcccgccaccgtctctatattcctgtgggtcgtttctagt ccacattgttcttcccatcgtaattattcttatcatcaacgccatttgcgcgaccgatttcttcttggaggagtaacctc attagcgtatgaagtataactgctgaaaaatggaaaattgtagaaggcgaaaaacaaagtcaaagtaggaagtgaactta gaaaagtaaaaaatatttgtcttaagaacattaatttttggaccattctttttacagaatggccaatttagacacttaag aaagtattttcattttcctaatatggagtttattttttttttgtatagaaaaactatgaaatggttgtacagtcattttc cactttttttttccacttcgaagttaagccaaaaaaaataagccattttggatcattttgcctcactacagcctttacaa aatagccatttcagagtcttcaaaatcttgtcacttttagattactaataattttttgcagcagttttgtgaatacagaa tctgcaatgtgcttgtacagtttttttttgtgtggttagccataaaatagaccactttggactattctggcttaataggg tccttgcaaaatggccattttagacacttctcacaatctggtcattcttcgaatacttagtattttttcgagaagttttg tgaataaagtatctgcaatgtg |
|
Protein
| Protein ID | aacu_s0062.g8.t1 |
|---|---|
| Definition | - |
>aacu_s0062.g8.t1 MLSKLSWVFYTTLILITLLRKNFIVDSKHVGLQSKCNVQAISCSCKENYGLEEYVTVELCLNHTKSPCQVKAVMDQCRKK AFSSHARQKRNMQDSKCQNGTLTNGVSKSPSEPILMAGTNGPTKIRREGNDAIFHCIVHSSLPANITWFYNGKPLMNDSL HRYFECNTVLHLRFVSSKDAGNYSCVVNSALGKTTASSRLSVIPRHKDPIILSMGLDDDKNSNTAIIIVGSNVNLTCKIR NPQIQNTFEKNGRDLDEDKDYTYHNFGDDEGEIKRSVLEIKNVTLEDEGNYTCVAFREGATTRRYFYLKVEATVPPDDSS TKTLALVFGGIGVLILVGLAFISLRNRTQRLSRYLTQGSRNNNQEARVPLSQTELSVTQIEPNGECVSEAPHNHENVEKR PPEKDYDARYDVFICYSYKDIGWVKELVAELEKLHFVCCIDFRDFVPGAAIVENISEAIYYSAKTIAVLSPNFLNSEWCN RELQQALTRTRKHQVVPIVYRSCAIPLTLQDKTYLDWENCLVKPFFWEQLEKALKRPCDGWIDQ |
|